SCOPe 2.04: Domain d3jy6d_: 3jy6 D:

Lineage for d3jy6d_ (3jy6 D:)

1. Root: SCOPe 2.04

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.93: Periplasmic binding protein-like I [53821] (1 superfamily)
   consists of two similar intertwined domain with 3 layers (a/b/a) each: duplication
   parallel beta-sheet of 6 strands, order 213456

4. Superfamily c.93.1: Periplasmic binding protein-like I [53822] (2 families)
   Similar in architecture to the superfamily II but partly differs in topology

5. Family c.93.1.0: automated matches [191439] (1 protein)
   not a true family

6. Protein automated matches [190646] (49 species)
   not a true protein

7. Species Lactobacillus brevis [TaxId:387344] [225768] (1 PDB entry)

8. Domain d3jy6d_: 3jy6 D: [212144]
   automated match to d2nzug_
   complexed with cl, edo

Details for d3jy6d_

PDB Entry: 3jy6, 1.97 Å

PDB Description: crystal structure of laci transcriptional regulator from lactobacillus brevis

PDB Compounds: (D:) Transcriptional regulator, LacI family

SCOPe Domain Sequences for d3jy6d_:

Sequence, based on SEQRES records:

>d3jy6d_ c.93.1.0 (D:) automated matches {Lactobacillus brevis [TaxId: 387344]}
kliavivaniddyfstelfkgissilesrgyigvlfdanadierektllraigsrgfdgl
ilqsfsnpqtvqeilhqqmpvvsvdremdacpwpqvvtdnfeaakaattafrqqgyqhvv
vltselelsrtrqeryrgilaaaqdvdvlevsessynhsevhqrltqlitqndqktvafa
lkerwlleffpnliisglidnqtvtatgfadtdfirrmepkltlitqnpflmgassaeim
lrqlagekvapekmvipaklqe

Sequence, based on observed residues (ATOM records):

>d3jy6d_ c.93.1.0 (D:) automated matches {Lactobacillus brevis [TaxId: 387344]}
kliavivaniddyfstelfkgissilesrgyigvlfdanadierektllraigsrgfdgl
ilqsfsnpqtvqeilhqqmpvvsvdremdacpwpqvvtdnfeaakaattafrqqgyqhvv
vltselelsrtrqeryrgilaaaqdvdvlevsessyhsevhqrltqlitqndqktvafal
kerwlleffpnliisglidnqtvtatgfadtdfirrmepkltlitqnpflmgassaeiml
rqlagekvapekmvipaklqe

Timeline for d3jy6d_:

• d3jy6d_ first appeared in SCOPe 2.03
  
• d3jy6d_ appears in SCOPe 2.05
  
• d3jy6d_ appears in the current release, SCOPe 2.08, called d3jy6d1