SCOPe 2.08: Domain d3jy6d1: 3jy6 D:68-328

Lineage for d3jy6d1 (3jy6 D:68-328)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.93: Periplasmic binding protein-like I [53821] (1 superfamily)
   consists of two similar intertwined domain with 3 layers (a/b/a) each: duplication
   parallel beta-sheet of 6 strands, order 213456

4. Superfamily c.93.1: Periplasmic binding protein-like I [53822] (2 families)
   Similar in architecture to the superfamily II but partly differs in topology

5. Family c.93.1.0: automated matches [191439] (1 protein)
   not a true family

6. Protein automated matches [190646] (77 species)
   not a true protein

7. Species Lactobacillus brevis [TaxId:387344] [225768] (1 PDB entry)

8. Domain d3jy6d1: 3jy6 D:68-328 [212144]
   Other proteins in same PDB: d3jy6a2, d3jy6d2
   automated match to d2nzug_
   complexed with cl, edo

Details for d3jy6d1

PDB Entry: 3jy6, 1.97 Å

PDB Description: crystal structure of laci transcriptional regulator from lactobacillus brevis

PDB Compounds: (D:) Transcriptional regulator, LacI family

SCOPe Domain Sequences for d3jy6d1:

Sequence, based on SEQRES records:

>d3jy6d1 c.93.1.0 (D:68-328) automated matches {Lactobacillus brevis [TaxId: 387344]}
kliavivaniddyfstelfkgissilesrgyigvlfdanadierektllraigsrgfdgl
ilqsfsnpqtvqeilhqqmpvvsvdremdacpwpqvvtdnfeaakaattafrqqgyqhvv
vltselelsrtrqeryrgilaaaqdvdvlevsessynhsevhqrltqlitqndqktvafa
lkerwlleffpnliisglidnqtvtatgfadtdfirrmepkltlitqnpflmgassaeim
lrqlagekvapekmvipaklq

Sequence, based on observed residues (ATOM records):

>d3jy6d1 c.93.1.0 (D:68-328) automated matches {Lactobacillus brevis [TaxId: 387344]}
kliavivaniddyfstelfkgissilesrgyigvlfdanadierektllraigsrgfdgl
ilqsfsnpqtvqeilhqqmpvvsvdremdacpwpqvvtdnfeaakaattafrqqgyqhvv
vltselelsrtrqeryrgilaaaqdvdvlevsessyhsevhqrltqlitqndqktvafal
kerwlleffpnliisglidnqtvtatgfadtdfirrmepkltlitqnpflmgassaeiml
rqlagekvapekmvipaklq

Timeline for d3jy6d1:

• d3jy6d1 first appeared in SCOPe 2.03, called d3jy6d_
  
• d3jy6d1 appears in SCOPe 2.07