SCOPe 2.06: Domain d3itgb2: 3itg B:262-610

Lineage for d3itgb2 (3itg B:262-610)

1. Root: SCOPe 2.06

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.23: FAD-linked oxidoreductase [51730] (2 families)
   distinct cofactor-binding mode from both FMN- and NAD(P)-linked TIM-barrel oxidoreductases; families are related by a circular permutation

5. Family c.1.23.2: Proline dehydrohenase domain of bifunctional PutA protein [82279] (2 proteins)
   automatically mapped to Pfam PF01619

6. Protein Proline dehydrohenase domain of bifunctional PutA protein [82280] (2 species)

7. Species Escherichia coli K-12 [TaxId:83333] [224879] (3 PDB entries)

8. Domain d3itgb2: 3itg B:262-610 [211945]
   Other proteins in same PDB: d3itga1, d3itgb1
   automated match to d1tj1a2
   complexed with fda

Details for d3itgb2

PDB Entry: 3itg, 2.15 Å

PDB Description: Structure the proline utilization A proline dehydrogenase domain (PutA86-630) inactivated with N-propargylglycine

PDB Compounds: (B:) Bifunctional protein putA

SCOPe Domain Sequences for d3itgb2:

Sequence, based on SEQRES records:

>d3itgb2 c.1.23.2 (B:262-610) Proline dehydrohenase domain of bifunctional PutA protein {Escherichia coli K-12 [TaxId: 83333]}
getiaealanarkleekgfrysydmlgeaaltaadaqaymvsyqqaihaigkasngrgiy
egpgisiklsalhprysraqydrvmeelyprlksltllarqydiginidaeesdrleisl
dlleklcfepelagwngigfviqayqkrcplvidylidlatrsrrrlmirlvkgaywdse
ikraqmdglegypvytrkvytdvsylacakkllavpnliypqfathnahtlaaiyqlagq
nyypgqyefqclhgmgeplyeqvtgkvadgklnrpcriyapvgthetllaylvrrlleng
antsfvnriadtslpldelvadpvtaveklaqqegqtglphpkiplprd

Sequence, based on observed residues (ATOM records):

>d3itgb2 c.1.23.2 (B:262-610) Proline dehydrohenase domain of bifunctional PutA protein {Escherichia coli K-12 [TaxId: 83333]}
getiaealanarkleekgfrysydmlgeaaltaadaqaymvsyqqaihaigkasngrgiy
egpgisiklsalhprysraqydrvmeelyprlksltllarqydiginidaeesdrleisl
dlleklcfepelagwngigfviqayqkrcplvidylidlatrsrrrlmirlvkgaywdse
ikraqmdglegypvytrkvytdvsylacakkllavpnliypqfathnahtlaaiyqlagq
nyypgqyefqclhgmgeplyeqvtgkvadgklnrpcriyapvgthetllaylvrgantsf
vnriadtslpldelvadpvtaveklaqqegqtglphpkiplprd

Timeline for d3itgb2:

• d3itgb2 first appeared in SCOPe 2.03
  
• d3itgb2 appears in SCOPe 2.05
  
• d3itgb2 appears in SCOPe 2.07
  
• d3itgb2 appears in the current release, SCOPe 2.08