SCOPe 2.03: Domain d3is4b1: 3is4 B:1-87,B:187-357

Lineage for d3is4b1 (3is4 B:1-87,B:187-357)

1. Root: SCOPe 2.03

2. Class c: Alpha and beta proteins (a/b) [51349] (147 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.12: Phosphoenolpyruvate/pyruvate domain [51621] (8 families)

5. Family c.1.12.1: Pyruvate kinase [51622] (1 protein)

6. Protein Pyruvate kinase, N-terminal domain [51623] (6 species)
   this domain is interrupted by an all-beta domain
   C-terminal domain is alpha/beta

7. Species Trypanosome (Leishmania mexicana) [TaxId:5665] [51626] (11 PDB entries)

8. Domain d3is4b1: 3is4 B:1-87,B:187-357 [211866]
   Other proteins in same PDB: d3is4a2, d3is4a3, d3is4b2, d3is4b3
   automated match to d1pkla2
   complexed with gol, ptk

Details for d3is4b1

PDB Entry: 3is4, 2.1 Å

PDB Description: crystal structure of leishmania mexicana pyruvate kinase (lmpyk)in complex with 1,3,6,8-pyrenetetrasulfonic acid

PDB Compounds: (B:) pyruvate kinase

SCOPe Domain Sequences for d3is4b1:

Sequence; same for both SEQRES and ATOM records:

>d3is4b1 c.1.12.1 (B:1-87,B:187-357) Pyruvate kinase, N-terminal domain {Trypanosome (Leishmania mexicana) [TaxId: 5665]}
sqlahnltlsifdpvanyraariictigpstqsvealkgliqsgmsvarmnfshgsheyh
qttinnvrqaaaelgvniaialdtkgpXpavsakdrvdlqfgveqgvdmifasfirsaeq
vgdvrkalgpkgrdimiickienhqgvqnidsiieesdgimvargdlgveipaekvvvaq
kiliskcnvagkpvicatqmlesmtynprptraevsdvanavfngadcvmlsgetakgky
pnevvqymaricleaqsal

Timeline for d3is4b1:

• d3is4b1 is new in SCOPe 2.03-stable
  
• d3is4b1 appears in SCOPe 2.04
  
• d3is4b1 appears in the current release, SCOPe 2.08