SCOP 1.63: Domain d1yekh2: 1yek H:114-223

Lineage for d1yekh2 (1yek H:114-223)

1. Root: SCOP 1.63

2. Class b: All beta proteins [48724] (119 folds)

3. Fold b.1: Immunoglobulin-like beta-sandwich [48725] (20 superfamilies)
   sandwich; 7 strands in 2 sheets; greek-key
   some members of the fold have additional strands

4. Superfamily b.1.1: Immunoglobulin [48726] (4 families)

5. Family b.1.1.2: C1 set domains (antibody constant domain-like) [48942] (9 proteins)

6. Protein Immunoglobulin (constant domains of L and H chains) [48972] (185 species)

7. Species Fab D2.3 (mouse), kappa L chain [49045] (6 PDB entries)

8. Domain d1yekh2: 1yek H:114-223 [21177]
   Other proteins in same PDB: d1yekh1, d1yekl1
   complexed with pnp, zn

Details for d1yekh2

PDB Entry: 1yek, 2.1 Å

PDB Description: catalytic antibody d2.3 complex

SCOP Domain Sequences for d1yekh2:

Sequence; same for both SEQRES and ATOM records:

>d1yekh2 b.1.1.2 (H:114-223) Immunoglobulin (constant domains of L and H chains) {Fab D2.3 (mouse), kappa L chain}
akttapsvyplapvcgdttgssvtlgclvkgyfpepvtltwnsgslssgvhtfpavlqsd
lytlsssvtvtsstwpsqsitcnvahpasstkvdkkiep

Timeline for d1yekh2:

• d1yekh2 first appeared (with stable ids) in SCOP 1.55
  
• d1yekh2 appears in SCOP 1.61
  
• d1yekh2 appears in SCOP 1.65
  
• d1yekh2 appears in the current release, SCOPe 2.08