Lineage for d1pskh2 (1psk H:115-209)

  1. Root: SCOP 1.73
  2. 651986Class b: All beta proteins [48724] (165 folds)
  3. 651987Fold b.1: Immunoglobulin-like beta-sandwich [48725] (27 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 651988Superfamily b.1.1: Immunoglobulin [48726] (4 families) (S)
  5. 654118Family b.1.1.2: C1 set domains (antibody constant domain-like) [48942] (23 proteins)
  6. 655111Protein Immunoglobulin heavy chain gamma constant domain 1, CH1-gamma [88574] (5 species)
  7. 655348Species Mouse (Mus musculus) [TaxId:10090] [88576] (330 PDB entries)
  8. 655615Domain d1pskh2: 1psk H:115-209 [21169]
    Other proteins in same PDB: d1pskh1, d1pskl1, d1pskl2
    part of antibody against the melanoma associated gd2 ganglioside

Details for d1pskh2

PDB Entry: 1psk (more details), 2.8 Å

PDB Description: the crystal structure of an fab fragment that binds to the melanoma-associated gd2 ganglioside
PDB Compounds: (H:) antibody

SCOP Domain Sequences for d1pskh2:

Sequence, based on SEQRES records: (download)

>d1pskh2 b.1.1.2 (H:115-209) Immunoglobulin heavy chain gamma constant domain 1, CH1-gamma {Mouse (Mus musculus) [TaxId: 10090]}
akttapsvyplapvcgdttgsavtlgclvkgyfpepvtltwnsgslssgvhtfpavlqsd
lytlsssvtvtsstwpsqsitcnvahpasstkvdk

Sequence, based on observed residues (ATOM records): (download)

>d1pskh2 b.1.1.2 (H:115-209) Immunoglobulin heavy chain gamma constant domain 1, CH1-gamma {Mouse (Mus musculus) [TaxId: 10090]}
akttapsvyplapvavtlgclvkgyfpepvtltwnssgvhtfpavlqsdlytlsssvtvt
sstwpsqsitcnvahpasstkvdk

SCOP Domain Coordinates for d1pskh2:

Click to download the PDB-style file with coordinates for d1pskh2.
(The format of our PDB-style files is described here.)

Timeline for d1pskh2:

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Domains from same chain:
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d1pskh1