Lineage for d1pskh2 (1psk H:115-209)

  1. Root: SCOP 1.55
  2. 6992Class b: All beta proteins [48724] (93 folds)
  3. 6993Fold b.1: Immunoglobulin-like beta-sandwich [48725] (14 superfamilies)
  4. 6994Superfamily b.1.1: Immunoglobulin [48726] (5 families) (S)
  5. 8163Family b.1.1.2: C1 set domains (antibody constant domain-like) [48942] (9 proteins)
  6. 8462Protein Immunoglobulin (constant domains of L and H chains) [48972] (152 species)
  7. 8807Species Fab against a ganglioside (mouse), kappa L chain [49044] (1 PDB entry)
  8. 8808Domain d1pskh2: 1psk H:115-209 [21169]
    Other proteins in same PDB: d1pskh1, d1pskl1

Details for d1pskh2

PDB Entry: 1psk (more details), 2.8 Å

PDB Description: the crystal structure of an fab fragment that binds to the melanoma-associated gd2 ganglioside

SCOP Domain Sequences for d1pskh2:

Sequence, based on SEQRES records: (download)

>d1pskh2 b.1.1.2 (H:115-209) Immunoglobulin (constant domains of L and H chains) {Fab against a ganglioside (mouse), kappa L chain}
akttapsvyplapvcgdttgsavtlgclvkgyfpepvtltwnsgslssgvhtfpavlqsd
lytlsssvtvtsstwpsqsitcnvahpasstkvdk

Sequence, based on observed residues (ATOM records): (download)

>d1pskh2 b.1.1.2 (H:115-209) Immunoglobulin (constant domains of L and H chains) {Fab against a ganglioside (mouse), kappa L chain}
akttapsvyplapvavtlgclvkgyfpepvtltwnssgvhtfpavlqsdlytlsssvtvt
sstwpsqsitcnvahpasstkvdk

SCOP Domain Coordinates for d1pskh2:

Click to download the PDB-style file with coordinates for d1pskh2.
(The format of our PDB-style files is described here.)

Timeline for d1pskh2:

View in 3D
Domains from same chain:
(mouse over for more information)
d1pskh1