Lineage for d3igub1 (3igu B:18-309)

  1. Root: SCOPe 2.04
  2. 1565955Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 1565956Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 1568602Superfamily c.1.8: (Trans)glycosidases [51445] (15 families) (S)
  5. 1568603Family c.1.8.1: Amylase, catalytic domain [51446] (26 proteins)
    members of the family may contain various insert subdomains
    in alpha-amylases and closer relatives this domain is usually followed by a common all-beta domain
  6. 1569091Protein automated matches [190099] (19 species)
    not a true protein
  7. 1569132Species Human (Homo sapiens) [TaxId:9606] [225770] (13 PDB entries)
  8. 1569147Domain d3igub1: 3igu B:18-309 [211681]
    Other proteins in same PDB: d3igua2, d3igub2
    automated match to d1ktba2
    complexed with 7jz, gol, nag

Details for d3igub1

PDB Entry: 3igu (more details), 2.15 Å

PDB Description: crystal structure of human alpha-n-acetylgalactosaminidase, covalent intermediate
PDB Compounds: (B:) alpha-N-acetylgalactosaminidase

SCOPe Domain Sequences for d3igub1:

Sequence; same for both SEQRES and ATOM records: (download)

>d3igub1 c.1.8.1 (B:18-309) automated matches {Human (Homo sapiens) [TaxId: 9606]}

SCOPe Domain Coordinates for d3igub1:

Click to download the PDB-style file with coordinates for d3igub1.
(The format of our PDB-style files is described here.)

Timeline for d3igub1:

View in 3D
Domains from same chain:
(mouse over for more information)