SCOPe 2.03: Domain d3gxdc2: 3gxd C:78-431

Lineage for d3gxdc2 (3gxd C:78-431)

1. Root: SCOPe 2.03

2. Class c: Alpha and beta proteins (a/b) [51349] (147 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.8: (Trans)glycosidases [51445] (15 families)

5. Family c.1.8.3: beta-glycanases [51487] (27 proteins)
   consist of a number of sequence families

6. Protein Glucosylceramidase, catalytic domain [89473] (1 species)
   acid-beta-glucosidase; glycosyl hydrolase family 30; contains additional beta-domain similar to one found in alpha amylases

7. Species Human (Homo sapiens) [TaxId:9606] [89474] (17 PDB entries)

8. Domain d3gxdc2: 3gxd C:78-431 [210695]
   Other proteins in same PDB: d3gxda1, d3gxdb1, d3gxdc1, d3gxdd1
   automated match to d1ogsa2
   complexed with nag, po4

Details for d3gxdc2

PDB Entry: 3gxd, 2.5 Å

PDB Description: crystal structure of apo acid-beta-glucosidase ph 4.5

PDB Compounds: (C:) glucosylceramidase

SCOPe Domain Sequences for d3gxdc2:

Sequence; same for both SEQRES and ATOM records:

>d3gxdc2 c.1.8.3 (C:78-431) Glucosylceramidase, catalytic domain {Human (Homo sapiens) [TaxId: 9606]}
vkgfggamtdaaalnilalsppaqnlllksyfseegigyniirvpmascdfsirtytyad
tpddfqlhnfslpeedtklkiplihralqlaqrpvsllaspwtsptwlktngavngkgsl
kgqpgdiyhqtwaryfvkfldayaehklqfwavtaenepsagllsgypfqclgftpehqr
dfiardlgptlansthhnvrllmlddqrlllphwakvvltdpeaakyvhgiavhwyldfl
apakatlgethrlfpntmlfaseacvgskfweqsvrlgswdrgmqyshsiitnllyhvvg
wtdwnlalnpeggpnwvrnfvdspiivditkdtfykqpmfyhlghfskfipegs

Timeline for d3gxdc2:

• d3gxdc2 is new in SCOPe 2.03-stable
  
• d3gxdc2 appears in SCOPe 2.04
  
• d3gxdc2 appears in the current release, SCOPe 2.08