SCOPe 2.08: Domain d3glmd1: 3glm D:3-291

Lineage for d3glmd1 (3glm D:3-291)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.14: ClpP/crotonase [52095] (1 superfamily)
   core: 4 turns of (beta-beta-alpha)n superhelix

4. Superfamily c.14.1: ClpP/crotonase [52096] (5 families)

5. Family c.14.1.4: Biotin dependent carboxylase carboxyltransferase domain [89572] (9 proteins)
   Pfam PF01039
   the active site is formed by two different homologous subunits or domains of this fold

6. Protein Glutaconyl-CoA decarboxylase A subunit, N-terminal domain [418958] (2 species)

7. Species Clostridium symbiosum [TaxId:1512] [419420] (4 PDB entries)

8. Domain d3glmd1: 3glm D:3-291 [210584]
   Other proteins in same PDB: d3glma2, d3glmb2, d3glmc2, d3glmd2
   automated match to d1pixa2
   complexed with cl, coo
   has additional insertions and/or extensions that are not grouped together

Details for d3glmd1

PDB Entry: 3glm, 2.5 Å

PDB Description: Glutaconyl-coA decarboxylase A subunit from Clostridium symbiosum co-crystallized with crotonyl-coA

PDB Compounds: (D:) Glutaconyl-CoA decarboxylase subunit A

SCOPe Domain Sequences for d3glmd1:

Sequence, based on SEQRES records:

>d3glmd1 c.14.1.4 (D:3-291) Glutaconyl-CoA decarboxylase A subunit, N-terminal domain {Clostridium symbiosum [TaxId: 1512]}
mysmpgyfqnmptigkelvnpnpeneqeikavesdihesikkaldagitseeklnergql
samqrinalidpgtwcplnslfnpennkfgttnivnglgrvdgkwvyivasdnkkmagaw
vpgqaenlircsdaakmmhlpliyllncsgvefpnqdkvypnrrgggtpffrnselnqlg
ipvivgiygtnpagggyhsisptiliahqdanmavggagilsgmnpkgyiddeaaeqiia
aqiensklkvpapgsvpihydetgffrevyqndlgvidgikkyisylpa

Sequence, based on observed residues (ATOM records):

>d3glmd1 c.14.1.4 (D:3-291) Glutaconyl-CoA decarboxylase A subunit, N-terminal domain {Clostridium symbiosum [TaxId: 1512]}
mysmpgyfqnmptigkelvnpnpeneqeikavesdihesikkaldagitseeklnergql
samqrinalidpgtwcplnslfnpennkfgttnivnglgrvdgkwvyivasdnkkmagaw
vpgqaenlircsdaakmmhlpliyllncsgvefpnqdkvypnrrgggtpffrnselnqlg
ipvivgiygtnpagggyhsisptiliahqdanmavggagaeqiiaaqiensklkvpapgs
vpihydetgffrevyqndlgvidgikkyisylpa

Timeline for d3glmd1:

• d3glmd1 first appeared in SCOPe 2.03
  
• d3glmd1 appears in SCOPe 2.07