SCOPe 2.06: Domain d3fyha2: 3fyh A:65-322

Lineage for d3fyha2 (3fyh A:65-322)

1. Root: SCOPe 2.06

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.37: P-loop containing nucleoside triphosphate hydrolases [52539] (1 superfamily)
   3 layers: a/b/a, parallel or mixed beta-sheets of variable sizes

4. Superfamily c.37.1: P-loop containing nucleoside triphosphate hydrolases [52540] (26 families)
   division into families based on beta-sheet topologies

5. Family c.37.1.11: RecA protein-like (ATPase-domain) [52670] (21 proteins)
   core: mixed beta-sheet of 8 strands, order 32451678; strand 7 is antiparallel to the rest

6. Protein DNA repair protein Rad51, catalytic domain [82412] (7 species)

7. Species Methanococcus voltae [TaxId:2188] [110555] (14 PDB entries)
   Uniprot O73948

8. Domain d3fyha2: 3fyh A:65-322 [210254]
   Other proteins in same PDB: d3fyha1
   automated match to d1t4ga2
   protein/DNA complex; complexed with adp, mg, na, w

Details for d3fyha2

PDB Entry: 3fyh, 1.9 Å

PDB Description: recombinase in complex with adp and metatungstate

PDB Compounds: (A:) DNA repair and recombination protein radA

SCOPe Domain Sequences for d3fyha2:

Sequence, based on SEQRES records:

>d3fyha2 c.37.1.11 (A:65-322) DNA repair protein Rad51, catalytic domain {Methanococcus voltae [TaxId: 2188]}
ksgidllkqrstvwklstssseldsvlggglesqsvtefagvfgsgktqimhqscvnlqn
peflfydeeavskgevaqpkavyidtegtfrperimqmaehagidgqtvldntfvarayn
sdmqmlfaekiedliqegnniklvvidsltstfrneytgrgklaerqqklgrhmatlnkl
adlfncvvlvtnqvsakpdaffgmaeqaigghivghaatfrffvrkgkgdkrvaklydsp
hlpdaeaifritekgiqd

Sequence, based on observed residues (ATOM records):

>d3fyha2 c.37.1.11 (A:65-322) DNA repair protein Rad51, catalytic domain {Methanococcus voltae [TaxId: 2188]}
ksgidllkqrstvwklstssseldsvlggglesqsvtefagvfgsgktqimhqscvnlqn
peflfydeeavskgevaqpkavyidtegtfrperimqmaehagidgqtvldntfvarayn
sdmqmlfaekiedliqegnniklvvidsltstfrneytklaerqqklgrhmatlnkladl
fncvvlvtnqvsghaatfrffvrkgkgdkrvaklydsphlpdaeaifritekgiqd

Timeline for d3fyha2:

• d3fyha2 first appeared in SCOPe 2.03
  
• d3fyha2 appears in SCOPe 2.05
  
• d3fyha2 appears in SCOPe 2.07
  
• d3fyha2 appears in the current release, SCOPe 2.08