SCOPe 2.08: Domain d2vira2: 2vir A:111-210

Lineage for d2vira2 (2vir A:111-210)

1. Root: SCOPe 2.08

2. Class b: All beta proteins [48724] (180 folds)

3. Fold b.1: Immunoglobulin-like beta-sandwich [48725] (33 superfamilies)
   sandwich; 7 strands in 2 sheets; greek-key
   some members of the fold have additional strands

4. Superfamily b.1.1: Immunoglobulin [48726] (5 families)

5. Family b.1.1.2: C1 set domains (antibody constant domain-like) [48942] (24 proteins)

6. Protein Immunoglobulin light chain lambda constant domain, CL-lambda [88570] (3 species)

7. Species Mouse (Mus musculus) [TaxId:10090] [88571] (22 PDB entries)
   Uniprot Q8N355 20-230 # 94% sequence identity; natural chimera: antibody light chain (Fab HYB3)

8. Domain d2vira2: 2vir A:111-210 [21010]
   Other proteins in same PDB: d2vira1, d2virb1, d2virb2, d2virc_
   part of Fab HC19
   complexed with zn

Details for d2vira2

PDB Entry: 2vir, 3.25 Å

PDB Description: influenza virus hemagglutinin complexed with a neutralizing antibody

PDB Compounds: (A:) immunoglobulin (igg1, lambda)

SCOPe Domain Sequences for d2vira2:

Sequence; same for both SEQRES and ATOM records:

>d2vira2 b.1.1.2 (A:111-210) Immunoglobulin light chain lambda constant domain, CL-lambda {Mouse (Mus musculus) [TaxId: 10090]}
qpksspsvtlfppsseeletnkatlvctitdfypgvvtvdwkvdgtpvtqgmettqpskq
snnkymassyltltarawerhssyscqvtheghtveksls

Timeline for d2vira2:

• d2vira2 first appeared (with stable ids) in SCOP 1.55
  
• d2vira2 appears in SCOPe 2.07