Lineage for d3eyvl1 (3eyv L:1-112)

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2017115Fold b.1: Immunoglobulin-like beta-sandwich [48725] (33 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 2017116Superfamily b.1.1: Immunoglobulin [48726] (5 families) (S)
  5. 2017117Family b.1.1.1: V set domains (antibody variable domain-like) [48727] (33 protein domains)
  6. 2018294Protein Immunoglobulin light chain kappa variable domain, VL-kappa [88519] (16 species)
    VL-kappa domains of human and mouse antibodies are clustered by the sequence similarity within the germline encoded segment and then by the size of the complementarity determining regions CDR1 and CDR2, so the clusters may correspond to putative germline families in the species genomes; VL-kappa domains with artificial or grafted exogenous CDRs are listed as engineered species
  7. 2018517Species Mouse (Mus musculus), cluster 1.1 [TaxId:10090] [88524] (132 PDB entries)
    Uniprot P01631 #KV2G_MOUSE Ig kappa chain V-II region 26-10; 79% sequence identity ! Uniprot P06310 # KV2F_HUMAN IG KAPPA CHAIN V-II REGION RPMI 6410 PRECURSOR ! Uniprot P03976 # KV2E_MOUSE (P03976) Ig kappa chain V-II region 17S29.1 ! Uniprot P01642 21-115 # ! KV2G_MOUSE IG KAPPA CHAIN V-II REGION 26-10
  8. 2018617Domain d3eyvl1: 3eyv L:1-112 [209749]
    Other proteins in same PDB: d3eyva2, d3eyvb2, d3eyvh2, d3eyvl2
    automated match to d1s3kl1
    complexed with gol, zn

Details for d3eyvl1

PDB Entry: 3eyv (more details), 2.5 Å

PDB Description: Anti-Lewis Y Fab fragment with Lewis Y antigen in the presence of zinc ions
PDB Compounds: (L:) hu3S193 Fab, light chain

SCOPe Domain Sequences for d3eyvl1:

Sequence; same for both SEQRES and ATOM records: (download)

>d3eyvl1 b.1.1.1 (L:1-112) Immunoglobulin light chain kappa variable domain, VL-kappa {Mouse (Mus musculus), cluster 1.1 [TaxId: 10090]}

SCOPe Domain Coordinates for d3eyvl1:

Click to download the PDB-style file with coordinates for d3eyvl1.
(The format of our PDB-style files is described here.)

Timeline for d3eyvl1: