SCOPe 2.08: Domain d3ewmb1: 3ewm B:4-305

Lineage for d3ewmb1 (3ewm B:4-305)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.72: Ribokinase-like [53612] (3 superfamilies)
   core: 3 layers: a/b/a; mixed beta-sheet of 8 strands, order 21345678, strand 7 is antiparallel to the rest
   potential superfamily: members of this fold have similar functions but different ATP-binding sites

4. Superfamily c.72.1: Ribokinase-like [53613] (6 families)
   has extra strand located between strands 2 and 3

5. Family c.72.1.0: automated matches [191321] (1 protein)
   not a true family

6. Protein automated matches [190117] (50 species)
   not a true protein

7. Species Pyrococcus horikoshii [TaxId:53953] [225557] (2 PDB entries)

8. Domain d3ewmb1: 3ewm B:4-305 [209688]
   Other proteins in same PDB: d3ewma2, d3ewmb2, d3ewmb3
   automated match to d2fv7a1

Details for d3ewmb1

PDB Entry: 3ewm, 1.9 Å

PDB Description: crystal structure of an uncharacterized sugar kinase ph1459 from pyrococcus horikoshii

PDB Compounds: (B:) Uncharacterized sugar kinase PH1459

SCOPe Domain Sequences for d3ewmb1:

Sequence, based on SEQRES records:

>d3ewmb1 c.72.1.0 (B:4-305) automated matches {Pyrococcus horikoshii [TaxId: 53953]}
iasigellidlisveegdlkdvrlfekhpggapanvavgvsrlgvkssliskvgndpfge
ylieelskenvdtrgivkdekkhtgivfvqlkgaspsfllyddvayfnmtlndinwdive
eakivnfgsvilarnpsretvmkvikkikgssliafdvnlrldlwrgqeeemikvleesi
kladivkaseeevlylenqgvevkgsmltaitlgpkgcrliknetvvdvpsynvnpldtt
gagdafmaallvgilklkgldllklgkfanlvaalstqkrgawstprkdellkykearev
la

Sequence, based on observed residues (ATOM records):

>d3ewmb1 c.72.1.0 (B:4-305) automated matches {Pyrococcus horikoshii [TaxId: 53953]}
iasigellidlisveegdlkdvrlfekhpggapanvavgvsrlgvkssliskvgndpfge
ylieelskenvdtrgivkdekkhtgivfvqlkgaspsfllyddvayfnmtlndinwdive
eakivnfgsvilarnpsretvmkvikkikgssliafdvnlrldlwrgqeeemikvleesi
kladivkaseeevlylenqgvevkgsmltaitlgpkgcrliknetvvdvpsgagdafmaa
llvgilklkgldllklgkfanlvaalstawstprkdellkykearevla

Timeline for d3ewmb1:

• d3ewmb1 first appeared in SCOPe 2.03, called d3ewmb_
  
• d3ewmb1 appears in SCOPe 2.07