SCOPe 2.04: Domain d3bd5a_: 3bd5 A:

Lineage for d3bd5a_ (3bd5 A:)

1. Root: SCOPe 2.04

2. Class b: All beta proteins [48724] (176 folds)

3. Fold b.1: Immunoglobulin-like beta-sandwich [48725] (31 superfamilies)
   sandwich; 7 strands in 2 sheets; greek-key
   some members of the fold have additional strands

4. Superfamily b.1.1: Immunoglobulin [48726] (5 families)

5. Family b.1.1.1: V set domains (antibody variable domain-like) [48727] (33 proteins)

6. Protein automated matches [190119] (19 species)
   not a true protein

7. Species Mouse (Mus musculus) [TaxId:10090] [186842] (122 PDB entries)

8. Domain d3bd5a_: 3bd5 A: [208613]
   automated match to d1eeqa_
   protein/DNA complex; complexed with btb, co

Details for d3bd5a_

PDB Entry: 3bd5, 2 Å

PDB Description: Crystal structure of single domain VL of an anti-DNA binding antibody 3D8 scFv and its active site revealed by complex structures of a small molecule and metals

PDB Compounds: (A:) catalytic antibody

SCOPe Domain Sequences for d3bd5a_:

Sequence; same for both SEQRES and ATOM records:

>d3bd5a_ b.1.1.1 (A:) automated matches {Mouse (Mus musculus) [TaxId: 10090]}
lvmsqspsslavsagekvtmsckssqslfnsrtrknylawyqqkpgqspklliywastre
sgvpdrftgsgsgtdftltissvqaedlavyyckqsyyhmytfgsgtkleik

Timeline for d3bd5a_:

• d3bd5a_ first appeared in SCOPe 2.03
  
• d3bd5a_ appears in SCOPe 2.05
  
• d3bd5a_ appears in the current release, SCOPe 2.08