SCOPe 2.08: Domain d2znyf1: 2zny F:25-84

Lineage for d2znyf1 (2zny F:25-84)

1. Root: SCOPe 2.08

2. Class a: All alpha proteins [46456] (290 folds)

3. Fold a.4: DNA/RNA-binding 3-helical bundle [46688] (14 superfamilies)
   core: 3-helices; bundle, closed or partly opened, right-handed twist; up-and down

4. Superfamily a.4.5: 'Winged helix' DNA-binding domain [46785] (86 families)
   contains a small beta-sheet (wing)

5. Family a.4.5.32: Lrp/AsnC-like transcriptional regulator N-terminal domain [68967] (4 proteins)
   Swapped dimer with the "wing" C-terminal strands
   automatically mapped to Pfam PF13412

6. Protein Putative transcriptional regulator PH1519 [101010] (1 species)
   archaeal feast/famine regulatory protein

7. Species Pyrococcus horikoshii [TaxId:53953] [101011] (4 PDB entries)
   identical sequence to Pyrococcus sp. ot3 protein

8. Domain d2znyf1: 2zny F:25-84 [207910]
   Other proteins in same PDB: d2znya2, d2znyb2, d2znyc2, d2znyd2, d2znye2, d2znyf2, d2znyg2, d2znyh2
   automated match to d1ri7a1
   complexed with arg

Details for d2znyf1

PDB Entry: 2zny, 2.59 Å

PDB Description: Crystal structure of the FFRP

PDB Compounds: (F:) Uncharacterized HTH-type transcriptional regulator PH1519

SCOPe Domain Sequences for d2znyf1:

Sequence; same for both SEQRES and ATOM records:

>d2znyf1 a.4.5.32 (F:25-84) Putative transcriptional regulator PH1519 {Pyrococcus horikoshii [TaxId: 53953]}
ldeidkkiikilqndgkaplreiskitglaestiherirklresgvikkftaiidpealg

Timeline for d2znyf1:

• d2znyf1 first appeared in SCOPe 2.03
  
• d2znyf1 appears in SCOPe 2.07