Lineage for d2yzna1 (2yzn A:1-114)

  1. Root: SCOPe 2.07
  2. 2413226Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2444095Fold c.30: PreATP-grasp domain [52439] (1 superfamily)
    3 layers: a/b/a; parallel or mixed beta-sheet of 4 to 6 strands
    possible rudiment form of Rossmann-fold domain
  4. 2444096Superfamily c.30.1: PreATP-grasp domain [52440] (10 families) (S)
    precedes the ATP-grasp domain common to all superfamily members, can contain a substrate-binding function
  5. 2444442Family c.30.1.0: automated matches [227183] (1 protein)
    not a true family
  6. 2444443Protein automated matches [226903] (37 species)
    not a true protein
  7. 2444572Species Thermus thermophilus HB8 [TaxId:300852] [225372] (3 PDB entries)
  8. 2444576Domain d2yzna1: 2yzn A:1-114 [207755]
    Other proteins in same PDB: d2yzna2, d2yznb2, d2yznc2
    automated match to d1e4ea1
    complexed with anp

Details for d2yzna1

PDB Entry: 2yzn (more details), 2.6 Å

PDB Description: Crystal structure of D-alanine:D-Alanine Ligase with AMPPNP from Thermus thermophilus HB8.
PDB Compounds: (A:) D-alanine-D-alanine ligase

SCOPe Domain Sequences for d2yzna1:

Sequence; same for both SEQRES and ATOM records: (download)

>d2yzna1 c.30.1.0 (A:1-114) automated matches {Thermus thermophilus HB8 [TaxId: 300852]}

SCOPe Domain Coordinates for d2yzna1:

Click to download the PDB-style file with coordinates for d2yzna1.
(The format of our PDB-style files is described here.)

Timeline for d2yzna1: