SCOPe 2.07: Domain d2yv1a2: 2yv1 A:128-293

Lineage for d2yv1a2 (2yv1 A:128-293)

1. Root: SCOPe 2.07

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.23: Flavodoxin-like [52171] (15 superfamilies)
   3 layers, a/b/a; parallel beta-sheet of 5 strand, order 21345

4. Superfamily c.23.4: Succinyl-CoA synthetase domains [52210] (2 families)

5. Family c.23.4.1: Succinyl-CoA synthetase domains [52211] (3 proteins)
   contain additional N-terminal strand "0", antiparallel to strand 2

6. Protein Succinyl-CoA synthetase, alpha-chain, C-terminal domain [52212] (6 species)

7. Species Methanocaldococcus jannaschii [TaxId:243232] [225350] (1 PDB entry)

8. Domain d2yv1a2: 2yv1 A:128-293 [207719]
   Other proteins in same PDB: d2yv1a1
   automated match to d2scua2

Details for d2yv1a2

PDB Entry: 2yv1, 1.7 Å

PDB Description: Crystal Structure of Succinyl-CoA Synthetase Alpha Chain from Methanocaldococcus jannaschii DSM 2661

PDB Compounds: (A:) Succinyl-CoA ligase [ADP-forming] subunit alpha

SCOPe Domain Sequences for d2yv1a2:

Sequence, based on SEQRES records:

>d2yv1a2 c.23.4.1 (A:128-293) Succinyl-CoA synthetase, alpha-chain, C-terminal domain {Methanocaldococcus jannaschii [TaxId: 243232]}
ntpgiaspkvgklgiipmevlkegsvgmvsrsgtltyeiahqikkagfgvstcvgiggdp
ivglrykevldlfekddeteaivmigeigggaeeeaakfiekmkkpvigyiagqsapegk
rmghagaivekgkgtaeskmkaleeagayvaknisdipkllagilg

Sequence, based on observed residues (ATOM records):

>d2yv1a2 c.23.4.1 (A:128-293) Succinyl-CoA synthetase, alpha-chain, C-terminal domain {Methanocaldococcus jannaschii [TaxId: 243232]}
ntpgiaspkvgklgiipmevlkegsvgmvsrsgtltyeiahqikkagfgvstcvgiggdp
ivglrykevldlfekddeteaivmigeigggaeeeaakfiekmkkpvigyiagqgtaesk
mkaleeagayvaknisdipkllagilg

Timeline for d2yv1a2:

• d2yv1a2 first appeared in SCOPe 2.03
  
• d2yv1a2 appears in SCOPe 2.06
  
• d2yv1a2 appears in the current release, SCOPe 2.08