SCOPe 2.03: Domain d2ypqb_: 2ypq B:

Lineage for d2ypqb_ (2ypq B:)

1. Root: SCOPe 2.03

2. Class c: Alpha and beta proteins (a/b) [51349] (147 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.10: Aldolase [51569] (9 families)
   Common fold covers whole protein structure

5. Family c.1.10.8: Class-II DAHP synthetase [141840] (2 proteins)
   Pfam PF01474

6. Protein automated matches [191084] (2 species)
   not a true protein

7. Species Mycobacterium tuberculosis [TaxId:83332] [189029] (6 PDB entries)

8. Domain d2ypqb_: 2ypq B: [207714]
   automated match to d3rzib_
   complexed with cl, gol, mn, po4, so4, trp, tyr

Details for d2ypqb_

PDB Entry: 2ypq, 2.76 Å

PDB Description: 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase with tryptophan and tyrosine bound

PDB Compounds: (B:) phospho-2-dehydro-3-deoxyheptonate aldolase arog

SCOPe Domain Sequences for d2ypqb_:

Sequence, based on SEQRES records:

>d2ypqb_ c.1.10.8 (B:) automated matches {Mycobacterium tuberculosis [TaxId: 83332]}
mnwtvdipidqlpslpplptdlrtrldaalakpaaqqptwpadqalamrtvlesvppvtv
pseivrlqeqlaqvakgeafllqggdcaetfmdntephirgnvrallqmavvltygasmp
vvkvariagqyakprsadidalglrsyrgdmingfapdaaarehdpsrlvrayanasaam
nlvraltssglaslhlvhdwnrefvrtspagaryealateidrglrfmsacgvadrnlqt
aeiyashealvldyeramlrlsdgddgepqlfdlsahtvwigertrqidgahiafaqvia
npvgvklgpnmtpelaveyverldphnkpgrltlvsrmgnhkvrdllppivekvqatghq
viwqcdpmhgnthesstgfktrhfdrivdevqgffevhralgthpggihveitgenvtec
lggaqdisetdlagryetacdprlntqqslelaflvaemlrd

Sequence, based on observed residues (ATOM records):

>d2ypqb_ c.1.10.8 (B:) automated matches {Mycobacterium tuberculosis [TaxId: 83332]}
mnwtvdipilpplptdlrtrldaalakpaaqqptwpadqalamrtvlesvppvtvpseiv
rlqeqlaqvakgeafllqggdcaetfmdntephirgnvrallqmavvltygasmpvvkva
riagqyakprsadidalglrsyrgdmingfapdaaarehdpsrlvrayanasaamnlvra
ltssglaslhlvhdwnrefvrtspagaryealateidrglrfmsacgvadrnlqtaeiya
shealvldyeramlrlsdgddgepqlfdlsahtvwigertrqidgahiafaqvianpvgv
klgpnmtpelaveyverldphnkpgrltlvsrmgnhkvrdllppivekvqatghqviwqc
dpmhgnthesstgfktrhfdrivdevqgffevhralgthpggihveitgenvteclggaq
disetdlagryetacdprlntqqslelaflvaemlrd

Timeline for d2ypqb_:

• d2ypqb_ is new in SCOPe 2.03-stable
  
• d2ypqb_ appears in SCOPe 2.04
  
• d2ypqb_ appears in the current release, SCOPe 2.08