SCOPe 2.08: Domain d2ypob_: 2ypo B:

Lineage for d2ypob_ (2ypo B:)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (34 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.10: Aldolase [51569] (9 families)
   Common fold covers whole protein structure

5. Family c.1.10.8: Class-II DAHP synthetase [141840] (2 proteins)
   Pfam PF01474

6. Protein automated matches [191084] (3 species)
   not a true protein

7. Species Mycobacterium tuberculosis [TaxId:83332] [189029] (7 PDB entries)

8. Domain d2ypob_: 2ypo B: [207712]
   automated match to d3rzib_
   complexed with gol, mn, phe, so4

Details for d2ypob_

PDB Entry: 2ypo, 2 Å

PDB Description: 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase with phenylalanine bound in only one site

PDB Compounds: (B:) phospho-2-dehydro-3-deoxyheptonate aldolase arog

SCOPe Domain Sequences for d2ypob_:

Sequence, based on SEQRES records:

>d2ypob_ c.1.10.8 (B:) automated matches {Mycobacterium tuberculosis [TaxId: 83332]}
mnwtvdipidqlpslpplptdlrtrldaalakpaaqqptwpadqalamrtvlesvppvtv
pseivrlqeqlaqvakgeafllqggdcaetfmdntephirgnvrallqmavvltygasmp
vvkvariagqyakprsadidalglrsyrgdmingfapdaaarehdpsrlvrayanasaam
nlvraltssglaslhlvhdwnrefvrtspagaryealateidrglrfmsacgvadrnlqt
aeiyashealvldyeramlrlsdgddgepqlfdlsahtvwigertrqidgahiafaqvia
npvgvklgpnmtpelaveyverldphnkpgrltlvsrmgnhkvrdllppivekvqatghq
viwqcdpmhgnthesstgfktrhfdrivdevqgffevhralgthpggihveitgenvtec
lggaqdisetdlagryetacdprlntqqslelaflvaemlrd

Sequence, based on observed residues (ATOM records):

>d2ypob_ c.1.10.8 (B:) automated matches {Mycobacterium tuberculosis [TaxId: 83332]}
mnwtvdipilpplptdlrtrldaalakpaaqqptwpadqalamrtvlesvppvtvpseiv
rlqeqlaqvakgeafllqggdcaetfmdntephirgnvrallqmavvltygasmpvvkva
riagqyakprsadidalglrsyrgdmingfapdaaarehdpsrlvrayanasaamnlvra
ltssglaslhlvhdwnrefvrtspagaryealateidrglrfmsacgvadrnlqtaeiya
shealvldyeramlrlsdgddgepqlfdlsahtvwigertrqidgahiafaqvianpvgv
klgpnmtpelaveyverldphnkpgrltlvsrmgnhkvrdllppivekvqatghqviwqc
dpmhgnthesstgfktrhfdrivdevqgffevhralgthpggihveitgenvteclggaq
disetdlagryetacdprlntqqslelaflvaemlrd

Timeline for d2ypob_:

• d2ypob_ first appeared in SCOPe 2.03
  
• d2ypob_ appears in SCOPe 2.07