SCOPe 2.05: Domain d2yp4a1: 2yp4 A:8-328

Lineage for d2yp4a1 (2yp4 A:8-328)

1. Root: SCOPe 2.05

2. Class b: All beta proteins [48724] (176 folds)

3. Fold b.19: Viral protein domain [49817] (1 superfamily)
   sandwich; 9 strands in 2 sheets; jelly-roll; form trimers

4. Superfamily b.19.1: Viral protein domain [49818] (4 families)
   forms homotrimers

5. Family b.19.1.2: Influenza hemagglutinin headpiece [49823] (2 proteins)

6. Protein automated matches [190291] (24 species)
   not a true protein

7. Species Influenza A virus [TaxId:11320] [187142] (19 PDB entries)

8. Domain d2yp4a1: 2yp4 A:8-328 [207703]
   automated match to d1ha0a1
   complexed with epe, nag, tam

Details for d2yp4a1

PDB Entry: 2yp4, 1.85 Å

PDB Description: haemagglutinin of 2004 human h3n2 virus in complex with human receptor analogue lstc

PDB Compounds: (A:) Hemagglutinin

SCOPe Domain Sequences for d2yp4a1:

Sequence; same for both SEQRES and ATOM records:

>d2yp4a1 b.19.1.2 (A:8-328) automated matches {Influenza A virus [TaxId: 11320]}
nstatlclghhavpngtivktitndqievtnatelvqssstggicdsphqildgenctli
dallgdpqcdgfqnkkwdlfverskaysncypydvpdyaslrslvassgtlefnnesfnw
tgvtqngtssackrrsnnsffsrlnwlthlkfkypalnvtmpnnekfdklyiwgvhhpgt
dndqislyaqasgritvstkrsqqtvipnigsrprvrdipsrisiywtivkpgdillins
tgnliaprgyfkirsgkssimrsdapigkcnsecitpngsipndkpfqnvnritygacpr
yvkqntlklatgmrnvpekqt

Timeline for d2yp4a1:

• d2yp4a1 first appeared in SCOPe 2.03
  
• d2yp4a1 appears in SCOPe 2.04
  
• d2yp4a1 appears in SCOPe 2.06
  
• d2yp4a1 appears in the current release, SCOPe 2.08