Lineage for d2yoza_ (2yoz A:)

  1. Root: SCOPe 2.07
  2. 2530962Class d: Alpha and beta proteins (a+b) [53931] (388 folds)
  3. 2563291Fold d.61: LigT-like [55143] (1 superfamily)
    duplication of beta-alpha-beta-alpha-beta motif: antiparallel beta sheet forms barrel (n=6, S=8) similar to the barrel of prokaryotic DNA topoisomerases I and III
  4. 2563292Superfamily d.61.1: LigT-like [55144] (5 families) (S)
  5. 2563306Family d.61.1.3: 2',3'-cyclic nucleotide 3'-phosphodiesterase, catalytic domain [103043] (2 proteins)
    automatically mapped to Pfam PF05881
  6. 2563311Protein automated matches [190813] (2 species)
    not a true protein
  7. 2563314Species Mouse (Mus musculus) [TaxId:10090] [189888] (31 PDB entries)
  8. 2563326Domain d2yoza_: 2yoz A: [207699]
    automated match to d2y3xb_
    complexed with 1pe, act, cl, gol, ove

Details for d2yoza_

PDB Entry: 2yoz (more details), 2.1 Å

PDB Description: catalytic domain of mouse 2',3'-cyclic nucleotide 3'- phosphodiesterase, crystallized with 2'-amps
PDB Compounds: (A:) 2,3-cyclic nucleotide 3'-phosphodiesterase

SCOPe Domain Sequences for d2yoza_:

Sequence, based on SEQRES records: (download)

>d2yoza_ d.61.1.3 (A:) automated matches {Mouse (Mus musculus) [TaxId: 10090]}
ekdflplyfgwfltkkssetlrkagqvfleelgnhkafkkelrhfisgdepkeklelvsy
fgkrppgvlhcttkfcdygkaagaeeyaqqevvkrsygkafklsisalfvtpktagaqvv
ltdqelqlwpsdldkpsaseglppgsrahvtlgcaadvqpvqtgldlldilqqvkggsqg
eavgelprgklyslgkgrwmlsltkkmevkaiftgyyg

Sequence, based on observed residues (ATOM records): (download)

>d2yoza_ d.61.1.3 (A:) automated matches {Mouse (Mus musculus) [TaxId: 10090]}
ekdflplyfgwfltkkssetlrkagqvfleelgnhkafkkelrhfeklelvsyfgkrppg
vlhcttkfcdygkaagaeeyaqqevvkrsygkafklsisalfvtpktagaqvvltdqelq
lwpsdldkpsaseglppgsrahvtlgcaadvqpvqtgldlldilqqvkggsqgeavgelp
rgklyslgkgrwmlsltkkmevkaiftgyyg

SCOPe Domain Coordinates for d2yoza_:

Click to download the PDB-style file with coordinates for d2yoza_.
(The format of our PDB-style files is described here.)

Timeline for d2yoza_: