Lineage for d1e28b_ (1e28 B:)

  1. Root: SCOP 1.63
  2. 218896Class b: All beta proteins [48724] (119 folds)
  3. 218897Fold b.1: Immunoglobulin-like beta-sandwich [48725] (20 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 218898Superfamily b.1.1: Immunoglobulin [48726] (4 families) (S)
  5. 220405Family b.1.1.2: C1 set domains (antibody constant domain-like) [48942] (9 proteins)
  6. 220417Protein Class I MHC, beta2-microglobulin and alpha-3 domain [48945] (20 species)
  7. 220540Species Human (Homo sapiens), HLA-B*5101 [TaxId:9606] [48954] (2 PDB entries)
  8. 220544Domain d1e28b_: 1e28 B: [20766]
    Other proteins in same PDB: d1e28a2

Details for d1e28b_

PDB Entry: 1e28 (more details), 3 Å

PDB Description: nonstandard peptide binding of hla-b*5101 complexed with hiv immunodominant epitope km2(taftipsi)

SCOP Domain Sequences for d1e28b_:

Sequence; same for both SEQRES and ATOM records: (download)

>d1e28b_ b.1.1.2 (B:) Class I MHC, beta2-microglobulin and alpha-3 domain {Human (Homo sapiens), HLA-B*5101}
iqrtpkiqvysrhpaengksnflncyvsgfhpsdievdllkngeriekvehsdlsfskdw
sfyllyyteftptekdeyacrvnhvtlsqpkivkwdrdm

SCOP Domain Coordinates for d1e28b_:

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Timeline for d1e28b_: