Lineage for d1agca1 (1agc A:182-276)

  1. Root: SCOP 1.57
  2. 51639Class b: All beta proteins [48724] (104 folds)
  3. 51640Fold b.1: Immunoglobulin-like beta-sandwich [48725] (14 superfamilies)
  4. 51641Superfamily b.1.1: Immunoglobulin [48726] (5 families) (S)
  5. 52912Family b.1.1.2: C1 set domains (antibody constant domain-like) [48942] (9 proteins)
  6. 52919Protein Class I MHC, beta2-microglobulin and alpha-3 domain [48945] (19 species)
  7. 53033Species Human (Homo sapiens), HLA-B0801 [TaxId:9606] [48951] (5 PDB entries)
  8. 53036Domain d1agca1: 1agc A:182-276 [20743]
    Other proteins in same PDB: d1agca2

Details for d1agca1

PDB Entry: 1agc (more details), 2.1 Å

PDB Description: antagonist hiv-1 gag peptides induce structural changes in hla b8-hiv-1 gag peptide (ggkkkyql-7q mutation)
PDB Compounds: (A:)

SCOP Domain Sequences for d1agca1:

Sequence; same for both SEQRES and ATOM records: (download)

>d1agca1 b.1.1.2 (A:182-276) Class I MHC, beta2-microglobulin and alpha-3 domain {Human (Homo sapiens), HLA-B0801}
adppkthvthhpisdheatlrcwalgfypaeitltwqrdgedqtqdtelvetrpagdrtf
qkwaavvvpsgeeqrytchvqheglpkpltlrwep

SCOP Domain Coordinates for d1agca1:

Click to download the PDB-style file with coordinates for d1agca1.
(The format of our PDB-style files is described here.)

Timeline for d1agca1:

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Domains from same chain:
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d1agca2
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Domains from other chains:
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d1agcb1