SCOPe 2.01: Domain d1agdb_: 1agd B:

Lineage for d1agdb_ (1agd B:)

1. Root: SCOPe 2.01

2. Class b: All beta proteins [48724] (174 folds)

3. Fold b.1: Immunoglobulin-like beta-sandwich [48725] (28 superfamilies)
   sandwich; 7 strands in 2 sheets; greek-key
   some members of the fold have additional strands

4. Superfamily b.1.1: Immunoglobulin [48726] (5 families)

5. Family b.1.1.2: C1 set domains (antibody constant domain-like) [48942] (24 proteins)

6. Protein beta2-microglobulin [88600] (5 species)

7. Species Human (Homo sapiens) [TaxId:9606] [88602] (328 PDB entries)
   Uniprot P61769 21-119 ! Uniprot P01884

8. Domain d1agdb_: 1agd B: [20742]
   Other proteins in same PDB: d1agda1, d1agda2

Details for d1agdb_

PDB Entry: 1agd, 2.05 Å

PDB Description: antagonist hiv-1 gag peptides induce structural changes in hla b8-hiv-1 gag peptide (ggkkkykl-index peptide)

PDB Compounds: (B:) beta-2 microglobulin

SCOPe Domain Sequences for d1agdb_:

Sequence; same for both SEQRES and ATOM records:

>d1agdb_ b.1.1.2 (B:) beta2-microglobulin {Human (Homo sapiens) [TaxId: 9606]}
iqrtpkiqvysrhpaengksnflncyvsgfhpsdievdllkngeriekvehsdlsfskdw
sfyllyyteftptekdeyacrvnhvtlsqpkivkwdrdm

Timeline for d1agdb_:

• d1agdb_ first appeared (with stable ids) in SCOP 1.55, called d1agdb1
  
• d1agdb_ appears in SCOP 1.75
  
• d1agdb_ appears in SCOPe 2.02
  
• d1agdb_ appears in the current release, SCOPe 2.08