Lineage for d1agdb_ (1agd B:)

  1. Root: SCOP 1.67
  2. 362614Class b: All beta proteins [48724] (141 folds)
  3. 362615Fold b.1: Immunoglobulin-like beta-sandwich [48725] (22 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 362616Superfamily b.1.1: Immunoglobulin [48726] (4 families) (S)
  5. 364354Family b.1.1.2: C1 set domains (antibody constant domain-like) [48942] (22 proteins)
  6. 364355Protein beta2-microglobulin [88600] (4 species)
  7. 364358Species Human (Homo sapiens) [TaxId:9606] [88602] (80 PDB entries)
  8. 364372Domain d1agdb_: 1agd B: [20742]
    Other proteins in same PDB: d1agda1, d1agda2

Details for d1agdb_

PDB Entry: 1agd (more details), 2.05 Å

PDB Description: antagonist hiv-1 gag peptides induce structural changes in hla b8-hiv-1 gag peptide (ggkkkykl-index peptide)

SCOP Domain Sequences for d1agdb_:

Sequence; same for both SEQRES and ATOM records: (download)

>d1agdb_ b.1.1.2 (B:) beta2-microglobulin {Human (Homo sapiens)}
iqrtpkiqvysrhpaengksnflncyvsgfhpsdievdllkngeriekvehsdlsfskdw
sfyllyyteftptekdeyacrvnhvtlsqpkivkwdrdm

SCOP Domain Coordinates for d1agdb_:

Click to download the PDB-style file with coordinates for d1agdb_.
(The format of our PDB-style files is described here.)

Timeline for d1agdb_: