Lineage for d1qr1b_ (1qr1 B:)

  1. Root: SCOPe 2.04
  2. 1510239Class b: All beta proteins [48724] (176 folds)
  3. 1510240Fold b.1: Immunoglobulin-like beta-sandwich [48725] (31 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 1510241Superfamily b.1.1: Immunoglobulin [48726] (5 families) (S)
  5. 1513476Family b.1.1.2: C1 set domains (antibody constant domain-like) [48942] (24 proteins)
  6. 1513477Protein beta2-microglobulin [88600] (5 species)
  7. 1513489Species Human (Homo sapiens) [TaxId:9606] [88602] (369 PDB entries)
    Uniprot P61769 21-119 ! Uniprot P01884
  8. 1513826Domain d1qr1b_: 1qr1 B: [20713]
    Other proteins in same PDB: d1qr1a1, d1qr1a2, d1qr1d1, d1qr1d2

Details for d1qr1b_

PDB Entry: 1qr1 (more details), 2.4 Å

PDB Description: poor binding of a her-2/neu epitope (gp2) to hla-a2.1 is due to a lack of interactions in the center of the peptide
PDB Compounds: (B:) beta-2 microglobulin

SCOPe Domain Sequences for d1qr1b_:

Sequence; same for both SEQRES and ATOM records: (download)

>d1qr1b_ b.1.1.2 (B:) beta2-microglobulin {Human (Homo sapiens) [TaxId: 9606]}
miqrtpkiqvysrhpaengksnflncyvsgfhpsdievdllkngeriekvehsdlsfskd
wsfyllyyteftptekdeyacrvnhvtlsqpkivkwdrdm

SCOPe Domain Coordinates for d1qr1b_:

Click to download the PDB-style file with coordinates for d1qr1b_.
(The format of our PDB-style files is described here.)

Timeline for d1qr1b_: