SCOPe 2.08: Domain d2wqub1: 2wqu B:36-240

Lineage for d2wqub1 (2wqu B:36-240)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.10: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) [52046] (3 superfamilies)
   2 curved layers, a/b; parallel beta-sheet; order 1234...N; there are sequence similarities between different superfamilies

4. Superfamily c.10.2: L domain-like [52058] (9 families)
   less regular structure consisting of variable repeats

5. Family c.10.2.1: Internalin LRR domain [52059] (4 proteins)
   capped at the N-end with a truncated EF-hand subdomain
   this is a repeat family; one repeat unit is 2omx A:261-239 found in domain

6. Protein automated matches [226952] (2 species)
   not a true protein

7. Species Listeria monocytogenes [TaxId:169963] [225326] (6 PDB entries)

8. Domain d2wqub1: 2wqu B:36-240 [206946]
   Other proteins in same PDB: d2wqua2, d2wqub2, d2wquc2, d2wqud2, d2wque2, d2wquf2
   automated match to d1m9sa5
   complexed with gol, so4

Details for d2wqub1

PDB Entry: 2wqu, 2.6 Å

PDB Description: internalin domain of listeria monocytogenes inlb: triclinic crystal form

PDB Compounds: (B:) internalin b

SCOPe Domain Sequences for d2wqub1:

Sequence; same for both SEQRES and ATOM records:

>d2wqub1 c.10.2.1 (B:36-240) automated matches {Listeria monocytogenes [TaxId: 169963]}
etitvptpikqifsddafaetikdnlkkksvtdavtqnelnsidqiiannsdiksvqgiq
ylpnvtklflngnkltdikplanlknlgwlfldenkvkdlsslkdlkklkslslehngis
dinglvhlpqleslylgnnkitditvlsrltkldtlslednqisdivplagltklqnlyl
sknhisdlralaglknldvlelfsq

Timeline for d2wqub1:

• d2wqub1 first appeared in SCOPe 2.03
  
• d2wqub1 appears in SCOPe 2.07