Lineage for d2v6md1 (2v6m D:22-164)

  1. Root: SCOPe 2.03
  2. 1336837Class c: Alpha and beta proteins (a/b) [51349] (147 folds)
  3. 1346342Fold c.2: NAD(P)-binding Rossmann-fold domains [51734] (1 superfamily)
    core: 3 layers, a/b/a; parallel beta-sheet of 6 strands, order 321456
    The nucleotide-binding modes of this and the next two folds/superfamilies are similar
  4. 1346343Superfamily c.2.1: NAD(P)-binding Rossmann-fold domains [51735] (13 families) (S)
  5. 1349962Family c.2.1.0: automated matches [191313] (1 protein)
    not a true family
  6. 1349963Protein automated matches [190069] (159 species)
    not a true protein
  7. 1351288Species Thermus thermophilus [TaxId:300852] [187989] (15 PDB entries)
  8. 1351311Domain d2v6md1: 2v6m D:22-164 [206257]
    Other proteins in same PDB: d2v6ma2, d2v6mb2, d2v6mc2, d2v6md2
    automated match to d1llda1
    complexed with mes

Details for d2v6md1

PDB Entry: 2v6m (more details), 2.2 Å

PDB Description: crystal structure of lactate dehydrogenase from thermus thermophilus hb8 (apo form)
PDB Compounds: (D:) l-lactate dehydrogenase

SCOPe Domain Sequences for d2v6md1:

Sequence, based on SEQRES records: (download)

>d2v6md1 c.2.1.0 (D:22-164) automated matches {Thermus thermophilus [TaxId: 300852]}
mkvgivgsgmvgsatayalallgvarevvlvdldrklaqahaedilhatpfahpvwvrag
sygdlegaravvlaagvaqrpgetrlqlldrnaqvfaqvvprvleaapeavllvatnpvd
vmtqvayrlsglppgrvvgsg

Sequence, based on observed residues (ATOM records): (download)

>d2v6md1 c.2.1.0 (D:22-164) automated matches {Thermus thermophilus [TaxId: 300852]}
mkvgivgsgmvgsatayalallgvarevvlvdldrklaqahaedilhatpfahpvwvrag
sygdlegaravvlaagvaqqlldrnaqvfaqvvprvleaapeavllvatnpvdvmtqvay
rlsglppgrvvgsg

SCOPe Domain Coordinates for d2v6md1:

Click to download the PDB-style file with coordinates for d2v6md1.
(The format of our PDB-style files is described here.)

Timeline for d2v6md1: