SCOPe 2.06: Domain d2rdta1: 2rdt A:1-363

Lineage for d2rdta1 (2rdt A:1-363)

1. Root: SCOPe 2.06

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.4: FMN-linked oxidoreductases [51395] (2 families)

5. Family c.1.4.0: automated matches [191310] (1 protein)
   not a true family

6. Protein automated matches [190048] (21 species)
   not a true protein

7. Species Human (Homo sapiens) [TaxId:9606] [189110] (5 PDB entries)

8. Domain d2rdta1: 2rdt A:1-363 [206092]
   Other proteins in same PDB: d2rdta2
   automated match to d2w0ua_
   complexed with 2rd, fmn

Details for d2rdta1

PDB Entry: 2rdt, 1.95 Å

PDB Description: Crystal Structure of Human Glycolate Oxidase (GO) in Complex with CDST

PDB Compounds: (A:) hydroxyacid oxidase 1

SCOPe Domain Sequences for d2rdta1:

Sequence, based on SEQRES records:

>d2rdta1 c.1.4.0 (A:1-363) automated matches {Human (Homo sapiens) [TaxId: 9606]}
mlprlicindyeqhaksvlpksiydyyrsgandeetladniaafsrwklyprmlrnvaet
dlstsvlgqrvsmpicvgatamqrmahvdgelatvracqslgtgmmlsswatssieevae
agpealrwlqlyiykdrevtkklvrqaekmgykaifvtvdtpylgnrlddvrnrfklppq
lrmknfetstlsfspeenfgddsglaayvakaidpsiswedikwlrrltslpivakgilr
gddareavkhglngilvsnhgarqldgvpatidvlpeiveavegkvevfldggvrkgtdv
lkalalgakavfvgrpivwglafqgekgvqdvleilkeefrlamalsgcqnvkvidktlv
rkn

Sequence, based on observed residues (ATOM records):

>d2rdta1 c.1.4.0 (A:1-363) automated matches {Human (Homo sapiens) [TaxId: 9606]}
mlprlicindyeqhaksvlpksiydyyrsgandeetladniaafsrwklyprmlrnvaet
dlstsvlgqrvsmpicvgatamqrmahvdgelatvracqslgtgmmlsswatssieevae
agpealrwlqlyiykdrevtkklvrqaekmgykaifvtvdtpylgnrlddvrnrflaayv
akaidpsiswedikwlrrltslpivakgilrgddareavkhglngilvsnhgarqldgvp
atidvlpeiveavegkvevfldggvrkgtdvlkalalgakavfvgrpivwglafqgekgv
qdvleilkeefrlamalsgcqnvkvidktlvrkn

Timeline for d2rdta1:

• d2rdta1 first appeared in SCOPe 2.03, called d2rdta_
  
• d2rdta1 was called d2rdta_ in SCOPe 2.05
  
• d2rdta1 appears in SCOPe 2.07
  
• d2rdta1 appears in the current release, SCOPe 2.08