Lineage for d2r2ba1 (2r2b A:1-107)

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2017115Fold b.1: Immunoglobulin-like beta-sandwich [48725] (33 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 2017116Superfamily b.1.1: Immunoglobulin [48726] (5 families) (S)
  5. 2017117Family b.1.1.1: V set domains (antibody variable domain-like) [48727] (33 protein domains)
  6. 2018294Protein Immunoglobulin light chain kappa variable domain, VL-kappa [88519] (16 species)
    VL-kappa domains of human and mouse antibodies are clustered by the sequence similarity within the germline encoded segment and then by the size of the complementarity determining regions CDR1 and CDR2, so the clusters may correspond to putative germline families in the species genomes; VL-kappa domains with artificial or grafted exogenous CDRs are listed as engineered species
  7. 2018687Species Mouse (Mus musculus), cluster 1.2 [TaxId:10090] [88525] (51 PDB entries)
  8. 2018696Domain d2r2ba1: 2r2b A:1-107 [205942]
    Other proteins in same PDB: d2r2ba2, d2r2bb1, d2r2bb2
    automated match to d3t65a1
    complexed with zn

Details for d2r2ba1

PDB Entry: 2r2b (more details), 1.6 Å

PDB Description: Crystal structure of S25-2 Fab in complex with Kdo analogues
PDB Compounds: (A:) Fab, antibody fragment (IgG1k), light chain

SCOPe Domain Sequences for d2r2ba1:

Sequence; same for both SEQRES and ATOM records: (download)

>d2r2ba1 b.1.1.1 (A:1-107) Immunoglobulin light chain kappa variable domain, VL-kappa {Mouse (Mus musculus), cluster 1.2 [TaxId: 10090]}

SCOPe Domain Coordinates for d2r2ba1:

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Timeline for d2r2ba1:

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