SCOPe 2.04: Domain d2q60b_: 2q60 B:

Lineage for d2q60b_ (2q60 B:)

1. Root: SCOPe 2.04

2. Class a: All alpha proteins [46456] (285 folds)

3. Fold a.123: Nuclear receptor ligand-binding domain [48507] (1 superfamily)
   multihelical; 3 layers or orthogonally packed helices

4. Superfamily a.123.1: Nuclear receptor ligand-binding domain [48508] (2 families)

5. Family a.123.1.0: automated matches [191623] (1 protein)
   not a true family

6. Protein automated matches [191142] (5 species)
   not a true protein

7. Species Tunicate (Polyandrocarpa misakiensis) [TaxId:7723] [225459] (1 PDB entry)

8. Domain d2q60b_: 2q60 B: [205754]
   automated match to d2xhsa_

Details for d2q60b_

PDB Entry: 2q60, 2.9 Å

PDB Description: crystal structure of the ligand binding domain of polyandrocarpa misakiensis rxr in tetramer in absence of ligand

PDB Compounds: (B:) retinoid x receptor

SCOPe Domain Sequences for d2q60b_:

Sequence, based on SEQRES records:

>d2q60b_ a.123.1.0 (B:) automated matches {Tunicate (Polyandrocarpa misakiensis) [TaxId: 7723]}
ddmpvdkileaelisdpkveqvvpfeqvnendpvsnickaadrqlvtlvewakriphfss
lpledqvillragwnelliasfshrsidvkdsillasglhvhrhsahqagvgpifdrvlt
elvskmrdmmmdktelgclravvlfnpdvknpsdsahieslrekvyasleaycrskypdq
pgrfaklllrlpalrsiglkclehlfffkligdtpidkf

Sequence, based on observed residues (ATOM records):

>d2q60b_ a.123.1.0 (B:) automated matches {Tunicate (Polyandrocarpa misakiensis) [TaxId: 7723]}
ddmpvdkileaelisdckaadrqlvtlvewakriphfsslpledqvillragwnellias
fshrsidvkdsillasglhvhrhsahqagvgpifdrvltelvskmrdmmmdktelgclra
vvlfnpdvknpsdsahieslrekvyasleaycrskypdqpgrfaklllrlpalrsiglkc
lehlfffkligdtpidkf

Timeline for d2q60b_:

• d2q60b_ first appeared in SCOPe 2.03
  
• d2q60b_ appears in SCOPe 2.05
  
• d2q60b_ appears in the current release, SCOPe 2.08