Lineage for d2pzlb1 (2pzl B:1-306)

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2090218Fold c.2: NAD(P)-binding Rossmann-fold domains [51734] (1 superfamily)
    core: 3 layers, a/b/a; parallel beta-sheet of 6 strands, order 321456
    The nucleotide-binding modes of this and the next two folds/superfamilies are similar
  4. 2090219Superfamily c.2.1: NAD(P)-binding Rossmann-fold domains [51735] (13 families) (S)
  5. 2094257Family c.2.1.0: automated matches [191313] (1 protein)
    not a true family
  6. 2094258Protein automated matches [190069] (238 species)
    not a true protein
  7. 2094509Species Bordetella bronchiseptica [TaxId:518] [225344] (8 PDB entries)
  8. 2094523Domain d2pzlb1: 2pzl B:1-306 [205706]
    Other proteins in same PDB: d2pzla2, d2pzlb2
    automated match to d3enkb_
    complexed with nad, udp

Details for d2pzlb1

PDB Entry: 2pzl (more details), 2.39 Å

PDB Description: Crystal structure of the Bordetella bronchiseptica enzyme WbmG in complex with NAD and UDP
PDB Compounds: (B:) Putative nucleotide sugar epimerase/ dehydratase

SCOPe Domain Sequences for d2pzlb1:

Sequence, based on SEQRES records: (download)

>d2pzlb1 c.2.1.0 (B:1-306) automated matches {Bordetella bronchiseptica [TaxId: 518]}
mrilitggagclgsnliehwlpqgheilvidnfatgkrevlppvaglsviegsvtdagll
erafdsfkpthvvhsaaaykdpddwaedaatnvqgsinvakaaskagvkrllnfqtalcy
grpatvpipidsptapftsygisktageaflmmsdvpvvslrlanvtgprlaigpiptfy
krlkagqkcfcsdtvrdfldmsdflaiadlslqegrptgvfnvstgeghsikevfdvvld
yvgatlaepvpvvapgaddvpsvvldpsktetefgwkakvdfkdtitgqlawydkygvtd
ifshls

Sequence, based on observed residues (ATOM records): (download)

>d2pzlb1 c.2.1.0 (B:1-306) automated matches {Bordetella bronchiseptica [TaxId: 518]}
mrilitggagclgsnliehwlpqgheilvidnfatgkrevlppvaglsviegsvtdagll
erafdsfkpthvvhsaaaykdpddwaedaatnvqgsinvakaaskagvkrllnfqtalcy
grpatvpipidsptapftsygisktageaflmmsdvpvvslrlanvtgprlaigpiptfy
krlkagqkcfcsdtvrdfldmsdflaiadlslqegrptgvfnvstgeghsikevfdvvld
yvgapvpvvapgaddvpsvvldpsktetefgwkakvdfkdtitgqlawydkygvtdifsh
ls

SCOPe Domain Coordinates for d2pzlb1:

Click to download the PDB-style file with coordinates for d2pzlb1.
(The format of our PDB-style files is described here.)

Timeline for d2pzlb1:

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Domains from same chain:
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d2pzlb2