Lineage for d1e6oh1 (1e6o H:1-120)

  1. Root: SCOP 1.69
  2. 450777Class b: All beta proteins [48724] (144 folds)
  3. 450778Fold b.1: Immunoglobulin-like beta-sandwich [48725] (23 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 450779Superfamily b.1.1: Immunoglobulin [48726] (4 families) (S)
  5. 450780Family b.1.1.1: V set domains (antibody variable domain-like) [48727] (27 proteins)
  6. 450916Protein Immunoglobulin heavy chain variable domain, VH [88543] (20 species)
    VH domains of human and mouse antibodies are clustered by the sequence similarity within the germline encoded segment and then by the size of the complementarity determining regions CDR1 and CDR2, so the clusters may correspond to putative germline families in the species genomes; VH domains with artificial or grafted exogenous CDRs are listed as engineered species
  7. 451214Species Mouse (Mus musculus), cluster 3.2 [TaxId:10090] [88552] (143 PDB entries)
  8. 451230Domain d1e6oh1: 1e6o H:1-120 [20495]
    Other proteins in same PDB: d1e6oh2, d1e6ol1, d1e6ol2
    part of Fab 13B5 against HIV-1 capsid protein p24

Details for d1e6oh1

PDB Entry: 1e6o (more details), 1.8 Å

PDB Description: crystal structure of fab13b5 against hiv-1 capsid protein p24

SCOP Domain Sequences for d1e6oh1:

Sequence; same for both SEQRES and ATOM records: (download)

>d1e6oh1 b.1.1.1 (H:1-120) Immunoglobulin heavy chain variable domain, VH {Mouse (Mus musculus), cluster 3.2}

SCOP Domain Coordinates for d1e6oh1:

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(The format of our PDB-style files is described here.)

Timeline for d1e6oh1:

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