SCOPe 2.08: Domain d2iu6b1: 2iu6 B:2-328

Lineage for d2iu6b1 (2iu6 B:2-328)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.119: DAK1/DegV-like [82548] (1 superfamily)
   2 different domains; d1: [core: 3 layers, a/b/a; parallel sheet of 5 strands, order: 2134]; D2: [2 layers, a/b; mixed sheet of 6 strands, order 321645; strands 2 and 6 are antiparallel to the rest]

4. Superfamily c.119.1: DAK1/DegV-like [82549] (3 families)
   domain folds and architecture show some similarity to the tubulin-like GTPases; the nucleotide-binding sites of the Dihydroxyacetone kinase and tubulin families are different

5. Family c.119.1.0: automated matches [191443] (1 protein)
   not a true family

6. Protein automated matches [190655] (13 species)
   not a true protein

7. Species Lactococcus lactis [TaxId:1358] [188636] (3 PDB entries)

8. Domain d2iu6b1: 2iu6 B:2-328 [204861]
   Other proteins in same PDB: d2iu6a2, d2iu6b2
   automated match to d2iu4b_
   complexed with gol

Details for d2iu6b1

PDB Entry: 2iu6, 2 Å

PDB Description: regulation of the dha operon of lactococcus lactis

PDB Compounds: (B:) dihydroxyacetone kinase

SCOPe Domain Sequences for d2iu6b1:

Sequence, based on SEQRES records:

>d2iu6b1 c.119.1.0 (B:2-328) automated matches {Lactococcus lactis [TaxId: 1358]}
efynstneipeemlkgidltypqltylpetgilydntynektvpiisgggsghepahvgy
vgsgmlaaavtgplfippksknilkairqvnsgkgvfviiknfeadlkefneaikearte
gidvryivshddisvnaynfhkrhrgvagtillhkilgafakeggsideieqlalslspe
iytlgvalapvhfphqktsfvlaedevsfgigihgepgyrvekfegseriaielvnklka
einwqkkanknyillvnglgsttlmelysfqydvmrlleleglsvkfckvgnlmtscdms
gisltlcsvkdpkwldylnvptgafaw

Sequence, based on observed residues (ATOM records):

>d2iu6b1 c.119.1.0 (B:2-328) automated matches {Lactococcus lactis [TaxId: 1358]}
efynstneipeemlkgidltypqltylpetgilydntynektvpiisgggsghepahvgy
vgsgmlaaavtgplfippksknilkairqvnsgkgvfviiknfeadlkefneaikearte
gidvryivshddisvnaynfhkrhrgvagtillhkilgafakeggsideieqlalslspe
iytlgvalapvdevsfgigihgepgyrvekfegseriaielvnklkaeinwqkkanknyi
llvnglgsttlmelysfqydvmrlleleglsvkfckvgnlmtscdmsgisltlcsvkdpk
wldylnvptgafaw

Timeline for d2iu6b1:

• d2iu6b1 first appeared in SCOPe 2.03, called d2iu6b_
  
• d2iu6b1 appears in SCOPe 2.07