SCOPe 2.08: Domain d2i8cb2: 2i8c B:129-358

Lineage for d2i8cb2 (2i8c B:129-358)

1. Root: SCOPe 2.08

2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)

3. Fold d.142: ATP-grasp [56058] (2 superfamilies)
   Consists of two subdomains with different alpha+beta folds
   shares functional and structural similarities with the PIPK and protein kinase superfamilies

4. Superfamily d.142.1: Glutathione synthetase ATP-binding domain-like [56059] (11 families)

5. Family d.142.1.0: automated matches [227184] (1 protein)
   not a true family

6. Protein automated matches [226904] (39 species)
   not a true protein

7. Species Staphylococcus aureus [TaxId:93062] [225144] (2 PDB entries)

8. Domain d2i8cb2: 2i8c B:129-358 [204753]
   Other proteins in same PDB: d2i8ca1, d2i8ca3, d2i8cb1, d2i8cb3
   automated match to d1ehib2
   complexed with adp, mg, so4

Details for d2i8cb2

PDB Entry: 2i8c, 2.46 Å

PDB Description: Allosteric inhibition of Staphylococcus aureus D-alanine:D-alanine ligase revealed by crystallographic studies

PDB Compounds: (B:) D-alanine-D-alanine ligase

SCOPe Domain Sequences for d2i8cb2:

Sequence, based on SEQRES records:

>d2i8cb2 d.142.1.0 (B:129-358) automated matches {Staphylococcus aureus [TaxId: 93062]}
dklvmkqlfehrglpqlpyisflrseyekyehnilklvndklnypvfvkpanlgssvgis
kcnneaelkegikeafqfdrklvieqgvnareievavlgndypeatwpgevvkdvafydy
kskykdgkvqlqipadldedvqltlrnmaleafkatdcsglvradffvtednqiyinetn
ampgftafsmypklwenmglsypelitklielakerhqdkqknkykidrs

Sequence, based on observed residues (ATOM records):

>d2i8cb2 d.142.1.0 (B:129-358) automated matches {Staphylococcus aureus [TaxId: 93062]}
dklvmkqlfehrglpqlpyisflrseyekyehnilklvndklnypvfvkpanlgssvgis
kcnneaelkegikeafqfdrklvieqgvnareievavlgndypeatwpgevvkdvafvql
qipadldedvqltlrnmaleafkatdcsglvradffvtednqiyinetnampgftafsmy
pklwenmglsypelitklielakerhqdkqknkykidrs

Timeline for d2i8cb2:

• d2i8cb2 first appeared in SCOPe 2.03
  
• d2i8cb2 appears in SCOPe 2.07