Lineage for d1c5ch1 (1c5c H:1-113)

  1. Root: SCOP 1.69
  2. 450777Class b: All beta proteins [48724] (144 folds)
  3. 450778Fold b.1: Immunoglobulin-like beta-sandwich [48725] (23 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 450779Superfamily b.1.1: Immunoglobulin [48726] (4 families) (S)
  5. 450780Family b.1.1.1: V set domains (antibody variable domain-like) [48727] (27 proteins)
  6. 450916Protein Immunoglobulin heavy chain variable domain, VH [88543] (20 species)
    VH domains of human and mouse antibodies are clustered by the sequence similarity within the germline encoded segment and then by the size of the complementarity determining regions CDR1 and CDR2, so the clusters may correspond to putative germline families in the species genomes; VH domains with artificial or grafted exogenous CDRs are listed as engineered species
  7. 451214Species Mouse (Mus musculus), cluster 3.2 [TaxId:10090] [88552] (143 PDB entries)
  8. 451220Domain d1c5ch1: 1c5c H:1-113 [20475]
    Other proteins in same PDB: d1c5ch2, d1c5cl1, d1c5cl2
    part of humanized catalytic Fab 21D8 with a decarboxylase activity

Details for d1c5ch1

PDB Entry: 1c5c (more details), 1.61 Å

PDB Description: decarboxylase catalytic antibody 21d8-hapten complex

SCOP Domain Sequences for d1c5ch1:

Sequence; same for both SEQRES and ATOM records: (download)

>d1c5ch1 b.1.1.1 (H:1-113) Immunoglobulin heavy chain variable domain, VH {Mouse (Mus musculus), cluster 3.2}
qvqllepgtelvkpgasvklscrasgysftsywmhwvkqrpgqglewiglidpsngrtnf
ndkfksratltvdtssstaymqlssltsedsavyycvriaywgqgtlvtvss

SCOP Domain Coordinates for d1c5ch1:

Click to download the PDB-style file with coordinates for d1c5ch1.
(The format of our PDB-style files is described here.)

Timeline for d1c5ch1:

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Domains from same chain:
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d1c5ch2