Lineage for d2hnda2 (2hnd A:430-537)

  1. Root: SCOPe 2.05
  2. 1815291Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 1857400Fold c.55: Ribonuclease H-like motif [53066] (7 superfamilies)
    3 layers: a/b/a; mixed beta-sheet of 5 strands, order 32145; strand 2 is antiparallel to the rest
  4. 1859086Superfamily c.55.3: Ribonuclease H-like [53098] (15 families) (S)
    consists of one domain of this fold
  5. 1860195Family c.55.3.0: automated matches [191357] (1 protein)
    not a true family
  6. 1860196Protein automated matches [190396] (30 species)
    not a true protein
  7. 1860284Species Human immunodeficiency virus 1 [TaxId:11676] [225129] (15 PDB entries)
  8. 1860287Domain d2hnda2: 2hnd A:430-537 [204627]
    Other proteins in same PDB: d2hnda1, d2hndb_
    automated match to d1vrta1
    complexed with mg, nvp, po4; mutant

Details for d2hnda2

PDB Entry: 2hnd (more details), 2.5 Å

PDB Description: crystal structure of k101e mutant hiv-1 reverse transcriptase in complex with nevirapine
PDB Compounds: (A:) Reverse transcriptase/ribonuclease H

SCOPe Domain Sequences for d2hnda2:

Sequence, based on SEQRES records: (download)

>d2hnda2 c.55.3.0 (A:430-537) automated matches {Human immunodeficiency virus 1 [TaxId: 11676]}
ekepivgaetfyvdgaanretklgkagyvtnrgrqkvvtltdttnqktelqaiylalqds
glevnivtdsqyalgiiqaqpdqseselvnqiieqlikkekvylawvp

Sequence, based on observed residues (ATOM records): (download)

>d2hnda2 c.55.3.0 (A:430-537) automated matches {Human immunodeficiency virus 1 [TaxId: 11676]}
ekepivgaetfyvdagyvtnrgrqkvvtltdttnqktelqaiylalqdsglevnivtdsq
yalgiiqaqpdqseselvnqiieqlikkekvylawvp

SCOPe Domain Coordinates for d2hnda2:

Click to download the PDB-style file with coordinates for d2hnda2.
(The format of our PDB-style files is described here.)

Timeline for d2hnda2:

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Domains from same chain:
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d2hnda1
View in 3D
Domains from other chains:
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d2hndb_