Lineage for d1f4yl1 (1f4y L:1-110)

  1. Root: SCOPe 2.07
  2. 2344607Class b: All beta proteins [48724] (178 folds)
  3. 2344608Fold b.1: Immunoglobulin-like beta-sandwich [48725] (33 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 2344609Superfamily b.1.1: Immunoglobulin [48726] (5 families) (S)
  5. 2344610Family b.1.1.1: V set domains (antibody variable domain-like) [48727] (33 proteins)
  6. 2346703Protein Immunoglobulin light chain lambda variable domain, VL-lambda [88534] (9 species)
    VL-lambda domains of human antibodies are clustered by the sequence similarity within the germline encoded segment and then by the size of the complementarity determining regions CDR1 and CDR2, so the clusters may correspond to putative germline families in the human genome; mouse VL-lambda domains belong to a single germline family
  7. 2346795Species Mouse (Mus musculus) [TaxId:10090] [88541] (35 PDB entries)
  8. 2346840Domain d1f4yl1: 1f4y L:1-110 [20454]
    Other proteins in same PDB: d1f4yh1, d1f4yh2, d1f4yl2
    part of anti-carbohydrate Fab S-20-4
    complexed with mgu

Details for d1f4yl1

PDB Entry: 1f4y (more details), 2.8 Å

PDB Description: crystal structure of an anti-carbohydrate antibody directed against vibrio cholerae o1 in complex with antigen
PDB Compounds: (L:) antibody s-20-4, fab fragment, light chain

SCOPe Domain Sequences for d1f4yl1:

Sequence; same for both SEQRES and ATOM records: (download)

>d1f4yl1 b.1.1.1 (L:1-110) Immunoglobulin light chain lambda variable domain, VL-lambda {Mouse (Mus musculus) [TaxId: 10090]}

SCOPe Domain Coordinates for d1f4yl1:

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Timeline for d1f4yl1:

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