SCOP 1.67: Domain d1deed1: 1dee D:1501-1621

Lineage for d1deed1 (1dee D:1501-1621)

Root: SCOP 1.67
Class b: All beta proteins [48724] (141 folds)
Fold b.1: Immunoglobulin-like beta-sandwich [48725] (22 superfamilies)
sandwich; 7 strands in 2 sheets; greek-key
some members of the fold have additional strands
Superfamily b.1.1: Immunoglobulin [48726] (4 families)
Family b.1.1.1: V set domains (antibody variable domain-like) [48727] (24 proteins)

Protein Immunoglobulin heavy chain variable domain, VH [88543] (20 species)
VH domains of human and mouse antibodies are clustered by the sequence similarity within the germline encoded segment and then by the size of the complementarity determining regions CDR1 and CDR2, so the clusters may correspond to putative germline families in the species genomes; VH domains with artificial or grafted exogenous CDRs are listed as engineered species

Species Human (Homo sapiens), cluster 3 [TaxId:9606] [88547] (11 PDB entries)
Domain d1deed1: 1dee D:1501-1621 [20445]
Other proteins in same PDB: d1deea1, d1deea2, d1deeb2, d1deec1, d1deec2, d1deed2, d1deee1, d1deee2, d1deef2, d1deeg_, d1deeh_

Details for d1deed1

PDB Entry: 1dee (more details), 2.7 Å

PDB Description: structure of s. aureus protein a bound to a human igm fab

SCOP Domain Sequences for d1deed1:

Sequence; same for both SEQRES and ATOM records: (download)

>d1deed1 b.1.1.1 (D:1501-1621) Immunoglobulin heavy chain variable domain, VH {Human (Homo sapiens), cluster 3}
qvqlvesgggvvqpgkslrlscaasgftfsgygmhwvrqapgkglewvalisydesnkyy
adsvkgrftisrdnskntlylqmnslraedtavyycakvkfydptapndywgqgtlvtvs
s

SCOP Domain Coordinates for d1deed1:

Click to download the PDB-style file with coordinates for d1deed1.
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Timeline for d1deed1: