SCOP 1.73: Domain d1deea1: 1dee A:1-107

Lineage for d1deea1 (1dee A:1-107)

Root: SCOP 1.73
Class b: All beta proteins [48724] (165 folds)
Fold b.1: Immunoglobulin-like beta-sandwich [48725] (27 superfamilies)
sandwich; 7 strands in 2 sheets; greek-key
some members of the fold have additional strands
Superfamily b.1.1: Immunoglobulin [48726] (4 families)
Family b.1.1.1: V set domains (antibody variable domain-like) [48727] (29 proteins)

Protein Immunoglobulin light chain kappa variable domain, VL-kappa [88519] (14 species)
VL-kappa domains of human and mouse antibodies are clustered by the sequence similarity within the germline encoded segment and then by the size of the complementarity determining regions CDR1 and CDR2, so the clusters may correspond to putative germline families in the species genomes; VL-kappa domains with artificial or grafted exogenous CDRs are listed as engineered species

Species Human (Homo sapiens), cluster 1 [TaxId:9606] [88520] (18 PDB entries)
Domain d1deea1: 1dee A:1-107 [20442]
Other proteins in same PDB: d1deea2, d1deeb1, d1deeb2, d1deec2, d1deed1, d1deed2, d1deee2, d1deef1, d1deef2, d1deeg_, d1deeh_

Details for d1deea1

PDB Entry: 1dee (more details), 2.7 Å

PDB Description: structure of s. aureus protein a bound to a human igm fab

PDB Compounds: (A:) igm rf 2a2

SCOP Domain Sequences for d1deea1:

Sequence; same for both SEQRES and ATOM records: (download)

>d1deea1 b.1.1.1 (A:1-107) Immunoglobulin light chain kappa variable domain, VL-kappa {Human (Homo sapiens), cluster 1 [TaxId: 9606]}
diqmtqspsslsasvgdrvtitcrtsqsissylnwyqqkpgkapklliyaasslqsgvps
rfsgsgsgtdftltisslqpedfatyycqqsysaprtfgqgtkveik

SCOP Domain Coordinates for d1deea1:

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Timeline for d1deea1: