Lineage for d1cu4h1 (1cu4 H:3-110)

  1. Root: SCOP 1.73
  2. 651986Class b: All beta proteins [48724] (165 folds)
  3. 651987Fold b.1: Immunoglobulin-like beta-sandwich [48725] (27 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 651988Superfamily b.1.1: Immunoglobulin [48726] (4 families) (S)
  5. 651989Family b.1.1.1: V set domains (antibody variable domain-like) [48727] (29 proteins)
  6. 652160Protein Immunoglobulin heavy chain variable domain, VH [88543] (20 species)
    VH domains of human and mouse antibodies are clustered by the sequence similarity within the germline encoded segment and then by the size of the complementarity determining regions CDR1 and CDR2, so the clusters may correspond to putative germline families in the species genomes; VH domains with artificial or grafted exogenous CDRs are listed as engineered species
  7. 652522Species Mouse (Mus musculus), cluster 3.1 [TaxId:10090] [88551] (34 PDB entries)
  8. 652543Domain d1cu4h1: 1cu4 H:3-110 [20433]
    Other proteins in same PDB: d1cu4h2, d1cu4l1, d1cu4l2
    part of anti-prion Fab 3F4

Details for d1cu4h1

PDB Entry: 1cu4 (more details), 2.9 Å

PDB Description: crystal structure of the anti-prion fab 3f4 in complex with its peptide epitope
PDB Compounds: (H:) Fab heavy chain

SCOP Domain Sequences for d1cu4h1:

Sequence; same for both SEQRES and ATOM records: (download)

>d1cu4h1 b.1.1.1 (H:3-110) Immunoglobulin heavy chain variable domain, VH {Mouse (Mus musculus), cluster 3.1 [TaxId: 10090]}
klqqsgaelvrsgasvklsctasgfnikdyyiqwvkqrpeqglewigwidpengnseyap
rfqgkatmtadtlsntaylqlssltsedtavyycnadlhdywgqgttltvss

SCOP Domain Coordinates for d1cu4h1:

Click to download the PDB-style file with coordinates for d1cu4h1.
(The format of our PDB-style files is described here.)

Timeline for d1cu4h1:

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Domains from same chain:
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d1cu4h2