Lineage for d1cu4l1 (1cu4 L:1-106A)

  1. Root: SCOP 1.69
  2. 450777Class b: All beta proteins [48724] (144 folds)
  3. 450778Fold b.1: Immunoglobulin-like beta-sandwich [48725] (23 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 450779Superfamily b.1.1: Immunoglobulin [48726] (4 families) (S)
  5. 450780Family b.1.1.1: V set domains (antibody variable domain-like) [48727] (27 proteins)
  6. 451612Protein Immunoglobulin light chain kappa variable domain, VL-kappa [88519] (14 species)
    VL-kappa domains of human and mouse antibodies are clustered by the sequence similarity within the germline encoded segment and then by the size of the complementarity determining regions CDR1 and CDR2, so the clusters may correspond to putative germline families in the species genomes; VL-kappa domains with artificial or grafted exogenous CDRs are listed as engineered species
  7. 451743Species Mouse (Mus musculus), cluster 1.1 [TaxId:10090] [88524] (126 PDB entries)
  8. 451843Domain d1cu4l1: 1cu4 L:1-106A [20432]
    Other proteins in same PDB: d1cu4h1, d1cu4h2, d1cu4l2
    part of anti-prion Fab 3F4

Details for d1cu4l1

PDB Entry: 1cu4 (more details), 2.9 Å

PDB Description: crystal structure of the anti-prion fab 3f4 in complex with its peptide epitope

SCOP Domain Sequences for d1cu4l1:

Sequence; same for both SEQRES and ATOM records: (download)

>d1cu4l1 b.1.1.1 (L:1-106A) Immunoglobulin light chain kappa variable domain, VL-kappa {Mouse (Mus musculus), cluster 1.1}
dvvmtqtplslsvtigqpasisckssqslldsdgktyliwvfqrpgqspkrliflvskrd
sgvpdrftgsgsgtdftlkisrveaedvgvyycwqgthfphtvgggtkleia

SCOP Domain Coordinates for d1cu4l1:

Click to download the PDB-style file with coordinates for d1cu4l1.
(The format of our PDB-style files is described here.)

Timeline for d1cu4l1:

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Domains from same chain:
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d1cu4l2