SCOP 1.71: Domain d1dqml1: 1dqm L:1-107

Lineage for d1dqml1 (1dqm L:1-107)

1. Root: SCOP 1.71

2. Class b: All beta proteins [48724] (149 folds)

3. Fold b.1: Immunoglobulin-like beta-sandwich [48725] (25 superfamilies)
   sandwich; 7 strands in 2 sheets; greek-key
   some members of the fold have additional strands

4. Superfamily b.1.1: Immunoglobulin [48726] (4 families)

5. Family b.1.1.1: V set domains (antibody variable domain-like) [48727] (28 proteins)

6. Protein Immunoglobulin light chain kappa variable domain, VL-kappa [88519] (14 species)
   VL-kappa domains of human and mouse antibodies are clustered by the sequence similarity within the germline encoded segment and then by the size of the complementarity determining regions CDR1 and CDR2, so the clusters may correspond to putative germline families in the species genomes; VL-kappa domains with artificial or grafted exogenous CDRs are listed as engineered species

7. Species Mouse (Mus musculus), cluster 4 [TaxId:10090] [88531] (170 PDB entries)

8. Domain d1dqml1: 1dqm L:1-107 [20426]
   Other proteins in same PDB: d1dqmh1, d1dqmh2, d1dqml2
   part of anti-lysozyme Fab HYHEL-63

Details for d1dqml1

PDB Entry: 1dqm, 2.1 Å

PDB Description: crystal structure of anti-lysozyme antibody

SCOP Domain Sequences for d1dqml1:

Sequence; same for both SEQRES and ATOM records:

>d1dqml1 b.1.1.1 (L:1-107) Immunoglobulin light chain kappa variable domain, VL-kappa {Mouse (Mus musculus), cluster 4}
divltqspatlsvtpgdsvslscrasqsisnnlhwyqqkshesprllikyasqsisgips
rfsgsgsgtdftlsinsvetedfgmyfcqqsnswpytfgggtkleik

Timeline for d1dqml1:

• d1dqml1 first appeared (with stable ids) in SCOP 1.55
  
• d1dqml1 appears in SCOP 1.69
  
• d1dqml1 appears in SCOP 1.73
  
• d1dqml1 appears in the current release, SCOPe 2.08