SCOPe 2.07: Domain d2forb1: 2for B:2-298

Lineage for d2forb1 (2for B:2-298)

1. Root: SCOPe 2.07

2. Class a: All alpha proteins [46456] (289 folds)

3. Fold a.128: Terpenoid synthases [48575] (1 superfamily)
   multihelical; core: 8 helices (C-J) are arranged in 2 parallel layers

4. Superfamily a.128.1: Terpenoid synthases [48576] (6 families)
   duplication: two metal-binding sites are related by a pseudo dyad that also relates helices C-F to helices G-J

5. Family a.128.1.1: Isoprenyl diphosphate synthases [48577] (4 proteins)

6. Protein automated matches [190489] (5 species)
   not a true protein

7. Species Shigella flexneri [TaxId:623] [225048] (1 PDB entry)

8. Domain d2forb1: 2for B:2-298 [204253]
   Other proteins in same PDB: d2forb2
   automated match to d1rqjb_
   complexed with ipr, po4

Details for d2forb1

PDB Entry: 2for, 2 Å

PDB Description: crystal structure of the shigella flexneri farnesyl pyrophosphate synthase complex with an isopentenyl pyrophosphate

PDB Compounds: (B:) Geranyltranstransferase

SCOPe Domain Sequences for d2forb1:

Sequence, based on SEQRES records:

>d2forb1 a.128.1.1 (B:2-298) automated matches {Shigella flexneri [TaxId: 623]}
dfpqqleacvkqanqalsrfiaplpfqntpvvetmqygallggkrlrpflvyatghmfgv
stntldapaaavecihayslihddlpamddddlrrglptchvkfgeanailagdalqtla
fsilsdanmpevsdrdrismiselasasgiagmcggqaldldaegkhvpldalerihrhk
tgaliraavrlgalsagdkgrralpvldkyaesiglafqvqddildvvgdtatlgkrqga
dqqlgkstypallgleqarkkardliddarqalkqlaeqsldtsalealadyiiqrn

Sequence, based on observed residues (ATOM records):

>d2forb1 a.128.1.1 (B:2-298) automated matches {Shigella flexneri [TaxId: 623]}
dfpqqleacvkqanqalsrfiaplpfqntpvvetmqygallggkrlrpflvyatghmfgv
stntldapaaavecihayslihddlpamddddlrrglptchvkfgeanailagdalqtla
fsilsdanmpevsdrdrismiselasasgiagmcggqaldldaegkhvpldalerihrhk
tgaliraavrlgalsagdkgrralpvldkyaesiglafqvqddildvvkstypallgleq
arkkardliddarqalkqlaeqsldtsalealadyiiqrn

Timeline for d2forb1:

• d2forb1 first appeared in SCOPe 2.03, called d2forb_
  
• d2forb1 appears in SCOPe 2.06
  
• d2forb1 appears in the current release, SCOPe 2.08