SCOPe 2.07: Domain d2diea1: 2die A:5-395

Lineage for d2diea1 (2die A:5-395)

1. Root: SCOPe 2.07

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.8: (Trans)glycosidases [51445] (15 families)

5. Family c.1.8.1: Amylase, catalytic domain [51446] (26 proteins)
   members of the family may contain various insert subdomains
   in alpha-amylases and closer relatives this domain is usually followed by a common all-beta domain

6. Protein automated matches [190099] (33 species)
   not a true protein

7. Species Bacillus sp. [225222] (1 PDB entry)

8. Domain d2diea1: 2die A:5-395 [204017]
   Other proteins in same PDB: d2diea2
   automated match to d1ud2a2
   complexed with ca, na

Details for d2diea1

PDB Entry: 2die, 2.1 Å

PDB Description: Alkaline alpha-amylase AmyK from Bacillus sp. KSM-1378

PDB Compounds: (A:) amylase

SCOPe Domain Sequences for d2diea1:

Sequence; same for both SEQRES and ATOM records:

>d2diea1 c.1.8.1 (A:5-395) automated matches {Bacillus sp.}
tngtmmqyfewhlpndgnhwnrlrddaanlkskgitavwippawkgtsqndvgygaydly
dlgefnqkgtvrtkygtrsqlqgavtslknngiqvygdvvmnhkggadgtemvnavevnr
snrnqeisgeytieawtkfdfpgrgnthsnfkwrwyhfdgtdwdqsrqlqnkiykfrgtg
kawdwevdiengnydylmyadidmdhpevinelrnwgvwytntlnldgfridavkhikys
ytrdwlthvrnttgkpmfavaefwkndlaaienylnktswnhsvfdvplhynlynasnsg
gyfdmrnilngsvvqkhpihavtfvdnhdsqpgealesfvqswfkplayaliltreqgyp
svfygdyygipthgvpsmkskidpllqarqt

Timeline for d2diea1:

• d2diea1 first appeared in SCOPe 2.03
  
• d2diea1 appears in SCOPe 2.06
  
• d2diea1 appears in the current release, SCOPe 2.08