SCOPe 2.04: Domain d43c9d_: 43c9 D:

Lineage for d43c9d_ (43c9 D:)

1. Root: SCOPe 2.04

2. Class b: All beta proteins [48724] (176 folds)

3. Fold b.1: Immunoglobulin-like beta-sandwich [48725] (31 superfamilies)
   sandwich; 7 strands in 2 sheets; greek-key
   some members of the fold have additional strands

4. Superfamily b.1.1: Immunoglobulin [48726] (5 families)

5. Family b.1.1.1: V set domains (antibody variable domain-like) [48727] (33 proteins)

6. Protein Immunoglobulin heavy chain variable domain, VH [88543] (21 species)
   VH domains of human and mouse antibodies are clustered by the sequence similarity within the germline encoded segment and then by the size of the complementarity determining regions CDR1 and CDR2, so the clusters may correspond to putative germline families in the species genomes; VH domains with artificial or grafted exogenous CDRs are listed as engineered species

7. Species Mouse (Mus musculus), cluster 5 [TaxId:10090] [88555] (36 PDB entries)

8. Domain d43c9d_: 43c9 D: [20389]
   Other proteins in same PDB: d43c9a_, d43c9c_, d43c9e_, d43c9g_
   part of sterolytic and amidolytic Fv 43c9

Details for d43c9d_

PDB Entry: 43c9, 2.2 Å

PDB Description: crystallographic structure of the esterolytic and amidolytic 43c9 antibody

PDB Compounds: (D:) protein (immunoglobulin (heavy chain))

SCOPe Domain Sequences for d43c9d_:

Sequence; same for both SEQRES and ATOM records:

>d43c9d_ b.1.1.1 (D:) Immunoglobulin heavy chain variable domain, VH {Mouse (Mus musculus), cluster 5 [TaxId: 10090]}
gqvqlvesgpglvapsqslsitctvsgislsrynvhwvrqspgkglewlgmiwgggsiey
npalksrlsiskdnsksqiflkmnslqtddsamyycvsygyggdrfsywgqgtlvtvs

Timeline for d43c9d_:

• d43c9d_ first appeared (with stable ids) in SCOP 1.55
  
• d43c9d_ appears in SCOPe 2.03
  
• d43c9d_ appears in SCOPe 2.05
  
• d43c9d_ appears in the current release, SCOPe 2.08