Lineage for d2csdb1 (2csd B:3-293)

  1. Root: SCOPe 2.06
  2. 1976409Class a: All alpha proteins [46456] (289 folds)
  3. 2020677Fold a.267: Topoisomerase V catalytic domain-like [140978] (1 superfamily)
    multihelical; irregular array; contains small amount of beta-structure and a 3-helical bundle with a variant homeofomain-like fold and HTH motif (46688)
  4. 2020678Superfamily a.267.1: Topoisomerase V catalytic domain-like [140979] (1 family) (S)
  5. 2020679Family a.267.1.1: Topoisomerase V catalytic domain-like [140980] (1 protein)
  6. 2020680Protein Topoisomerase V, catalytic domain [140981] (1 species)
  7. 2020681Species Methanopyrus kandleri [TaxId:2320] [140982] (2 PDB entries)
    Uniprot Q977W1 3-293
    the HTH-like subdomain is formed by residues 180-232
  8. 2020685Domain d2csdb1: 2csd B:3-293 [203827]
    Other proteins in same PDB: d2csda2, d2csda3, d2csda4, d2csda5, d2csdb2, d2csdb3, d2csdb4, d2csdb5
    automated match to d2csba5

Details for d2csdb1

PDB Entry: 2csd (more details), 2.9 Å

PDB Description: crystal structure of topoisomerase v (61 kda fragment)
PDB Compounds: (B:) Topoisomerase V

SCOPe Domain Sequences for d2csdb1:

Sequence; same for both SEQRES and ATOM records: (download)

>d2csdb1 a.267.1.1 (B:3-293) Topoisomerase V, catalytic domain {Methanopyrus kandleri [TaxId: 2320]}
lvydaefvgserefeeeretflkgvkaydgvlatrylmersssakndeellelhqnfill
tgsyacsidptedryqnvivrgvnfdervqrlstggsparyaivyrrgwraiakaldide
edvpaievravkrnplqpalyrilvrygrvdlmpvtvdevppemageferlierydvpid
ekeerileilrenpwtphdeiarrlglsvsevegekdpessgiyslwsrvvvnieydert
akrhvkrrdrlleelyehleelserylrhpltrrwivehkrdimrryleqr

SCOPe Domain Coordinates for d2csdb1:

Click to download the PDB-style file with coordinates for d2csdb1.
(The format of our PDB-style files is described here.)

Timeline for d2csdb1: