Lineage for d1yx2b1 (1yx2 B:1-282)

  1. Root: SCOPe 2.07
  2. 2494617Class d: Alpha and beta proteins (a+b) [53931] (388 folds)
  3. 2565288Fold d.250: Folate-binding domain [103024] (1 superfamily)
    duplication: consists of two beta(2)-alpha-beta(3)-alpha subdomains swapped with the first strands
  4. 2565289Superfamily d.250.1: Folate-binding domain [103025] (2 families) (S)
    some topological similarity to Formylmethanofuran:tetrahydromethanopterin formyltransferase
  5. 2565290Family d.250.1.1: Aminomethyltransferase folate-binding domain [103026] (4 proteins)
  6. 2565291Protein Glycine cleavage system T protein, GcvT [111012] (4 species)
  7. 2565292Species Bacillus subtilis [TaxId:1423] [224968] (1 PDB entry)
  8. 2565294Domain d1yx2b1: 1yx2 B:1-282 [203236]
    Other proteins in same PDB: d1yx2a2, d1yx2b2
    automated match to d1v5va2
    complexed with edo

Details for d1yx2b1

PDB Entry: 1yx2 (more details), 2.08 Å

PDB Description: Crystal Structure of the Probable Aminomethyltransferase from Bacillus subtilis
PDB Compounds: (B:) Aminomethyltransferase

SCOPe Domain Sequences for d1yx2b1:

Sequence; same for both SEQRES and ATOM records: (download)

>d1yx2b1 d.250.1.1 (B:1-282) Glycine cleavage system T protein, GcvT {Bacillus subtilis [TaxId: 1423]}
mlkrtplfdlykeyggktidfggwelpvqfssikkeheavrtaaglfdvshmgevevsgn
dslsflqrlmtndvsaltpgraqytamcypdggtvddlliyqkgenryllvinasnidkd
lawmkehaagdvqidnqsdqiallavqgpkaeailknltdadvsalkpfafideadisgr
kalisrtgytgedgyeiycrsddamhiwkkiidagdayglipcglgardtlrfeaniply
gqeltrditpieagigfavkhkkesdffgksvlseqkengak

SCOPe Domain Coordinates for d1yx2b1:

Click to download the PDB-style file with coordinates for d1yx2b1.
(The format of our PDB-style files is described here.)

Timeline for d1yx2b1:

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Domains from same chain:
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d1yx2b2