Lineage for d1bfoc1 (1bfo C:1-107)

  1. Root: SCOP 1.65
  2. 287094Class b: All beta proteins [48724] (126 folds)
  3. 287095Fold b.1: Immunoglobulin-like beta-sandwich [48725] (20 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 287096Superfamily b.1.1: Immunoglobulin [48726] (4 families) (S)
  5. 287097Family b.1.1.1: V set domains (antibody variable domain-like) [48727] (21 proteins)
  6. 287738Protein Immunoglobulin light chain kappa variable domain, VL-kappa [88519] (14 species)
    VL-kappa domains of human and mouse antibodies are clustered by the sequence similarity within the germline encoded segment and then by the size of the complementarity determining regions CDR1 and CDR2, so the clusters may correspond to putative germline families in the species genomes; VL-kappa domains with artificial or grafted exogeneous CDRs are listed as engineered species
  7. 288262Species Rat (Rattus norvegicus) [TaxId:10116] [88532] (7 PDB entries)
  8. 288269Domain d1bfoc1: 1bfo C:1-107 [20312]
    Other proteins in same PDB: d1bfoa2, d1bfob1, d1bfob2, d1bfoc2, d1bfod1, d1bfod2, d1bfoe2, d1bfof1, d1bfof2, d1bfog2, d1bfoh1, d1bfoh2

Details for d1bfoc1

PDB Entry: 1bfo (more details), 2.6 Å

PDB Description: campath-1g igg2b rat monoclonal fab

SCOP Domain Sequences for d1bfoc1:

Sequence; same for both SEQRES and ATOM records: (download)

>d1bfoc1 b.1.1.1 (C:1-107) Immunoglobulin light chain kappa variable domain, VL-kappa {Rat (Rattus norvegicus)}
dikmtqspsflsasvgdrvtlnckasqnidkylnwyqqklgespklliyntnnlqtgips
rfsgsgsgtdftltisslqpedvatyfclqhisrprtfgtgtklelk

SCOP Domain Coordinates for d1bfoc1:

Click to download the PDB-style file with coordinates for d1bfoc1.
(The format of our PDB-style files is described here.)

Timeline for d1bfoc1: